PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127145.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 479aa MW: 53663.4 Da PI: 6.0952

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.9	1e-35	12	102	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d++++e++sws+n+nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++ XP_028127145.1 12 FLLKTYDMVDDSNTDEIVSWSSNNNSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFVKDQKHLLKN 97 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_028127145.1 98 IHRRK 102 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MDVASGGGPA PFLLKTYDMV DDSNTDEIVS WSSNNNSFVV WNPPEFARVL LPTYFKHNNF 60 SSFIRQLNTY GFRKIDPERW EFANEDFVKD QKHLLKNIHR RKPIHSHSHP HGTPVDQERA 120 AFEEEIDKLS REKVALEKAA CEKAALLSAA KLQLEDSTQR VNGMEQRQDK LLNYLETAIQ 180 NQNFVEHLAR KLEAMDFSAY NKKRRLPQVD YSQPVPENSF VDNHSSSRPE FGHVFHQDFS 240 NKLRLELSPS VSDINLVSHS TQSSNEDGGS PQRRLSEGYP KDAQMRAGGL PFAPKTLELS 300 DTGTSFMFMM DSTLSRKGGS GSPRLQSLQQ NLTSNEEGDG HISCHLNLTL ASSLSQVDNS 360 QSSARIQLGH EIGKSPELRS NVNGKVTDFR VSPSNRAFSD DDATLSSSQE APIKIQGPPA 420 PPPARVNDMF WEQFLTERPG ASDTEEASSS FRANPYDDQK DRSGYVMSGN AKNMDHLTL

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MDVASGGGPA PFLLKTYDMV DDSNTDEIVS WSSNNNSFVV WNPPEFARVL LPTYFKHNNF  60
SSFIRQLNTY GFRKIDPERW EFANEDFVKD QKHLLKNIHR RKPIHSHSHP HGTPVDQERA  120
AFEEEIDKLS REKVALEKAA CEKAALLSAA KLQLEDSTQR VNGMEQRQDK LLNYLETAIQ  180
NQNFVEHLAR KLEAMDFSAY NKKRRLPQVD YSQPVPENSF VDNHSSSRPE FGHVFHQDFS  240
NKLRLELSPS VSDINLVSHS TQSSNEDGGS PQRRLSEGYP KDAQMRAGGL PFAPKTLELS  300
DTGTSFMFMM DSTLSRKGGS GSPRLQSLQQ NLTSNEEGDG HISCHLNLTL ASSLSQVDNS  360
QSSARIQLGH EIGKSPELRS NVNGKVTDFR VSPSNRAFSD DDATLSSSQE APIKIQGPPA  420
PPPARVNDMF WEQFLTERPG ASDTEEASSS FRANPYDDQK DRSGYVMSGN AKNMDHLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-152	HSF family protein