PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127034.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 604aa MW: 65595.4 Da PI: 6.6741

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.6e-30	244	301	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkg efprsYY+Ct+++C+vkk ers+ +++++ei+Y+g+H+h+k XP_028127034.1 244 DDGYNWRKYGQKLVKGCEFPRSYYKCTHPNCEVKKIFERSH-EGQITEIVYKGTHDHPK 301 8**************************************.*************85 PP
2	WRKY	106.1	1.8e-33	417	475	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_028127034.1 417 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 475 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MADSLHSHSL SVSEDQPFDL RFYSSNPLRD ANSDSAAGSS SAKYKLFSPA KLPISRSPCI 60 TIPPGLSPTS FLESPVLLSN MKAEPSPTTG SFLKPHLMQC SGGTAGFSLS ANSSNRNSVD 120 GRQNSCFEFR PHTGSDSVSG LPPAAPTITA GTNNQKNEPY EQVQTQCQSQ SFASLPSVKS 180 EMASSSKELS LPASVHMFAS RATVHTGVDS DELNEGVPPS TGVQASQPDH KDIGPSVTAE 240 RSSDDGYNWR KYGQKLVKGC EFPRSYYKCT HPNCEVKKIF ERSHEGQITE IVYKGTHDHP 300 KPQPARRYTA GGIMSVQEKT DKFSSLTAQE DKSAINAQIS HHIESNGIPE LSAYGTNDDC 360 VEGAASQFNS TNDEGDDDDP FSKRRKLDGV GIDVTSVVKP IREPRVVVQT VSEVDILDDG 420 YRWRKYGQKV VRGNPNPRSY YKCTNAGCPV RKHVERASHD PKAVITTYEG KHNHDVPTAR 480 NSSHDMVGPA TVNGMSRVRS EESDSISLDL GVGISGSVAE NRSNERHQQV MDTEVLQNQA 540 NSVGSNFKVL QVNPIPTYYG VVNGGGVYGS RDNSVESSLN FQTQPLNHSS IPYPQNLERI 600 LLGP

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MADSLHSHSL SVSEDQPFDL RFYSSNPLRD ANSDSAAGSS SAKYKLFSPA KLPISRSPCI  60
TIPPGLSPTS FLESPVLLSN MKAEPSPTTG SFLKPHLMQC SGGTAGFSLS ANSSNRNSVD  120
GRQNSCFEFR PHTGSDSVSG LPPAAPTITA GTNNQKNEPY EQVQTQCQSQ SFASLPSVKS  180
EMASSSKELS LPASVHMFAS RATVHTGVDS DELNEGVPPS TGVQASQPDH KDIGPSVTAE  240
RSSDDGYNWR KYGQKLVKGC EFPRSYYKCT HPNCEVKKIF ERSHEGQITE IVYKGTHDHP  300
KPQPARRYTA GGIMSVQEKT DKFSSLTAQE DKSAINAQIS HHIESNGIPE LSAYGTNDDC  360
VEGAASQFNS TNDEGDDDDP FSKRRKLDGV GIDVTSVVKP IREPRVVVQT VSEVDILDDG  420
YRWRKYGQKV VRGNPNPRSY YKCTNAGCPV RKHVERASHD PKAVITTYEG KHNHDVPTAR  480
NSSHDMVGPA TVNGMSRVRS EESDSISLDL GVGISGSVAE NRSNERHQQV MDTEVLQNQA  540
NSVGSNFKVL QVNPIPTYYG VVNGGGVYGS RDNSVESSLN FQTQPLNHSS IPYPQNLERI  600
LLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-178	WRKY family protein