PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028126901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 238aa MW: 27296.8 Da PI: 7.9933 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.4 | 1.7e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev vi++sst ++ye++s XP_028126901.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGVIVISSTKRFYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 88.1 | 1.7e-29 | 81 | 170 | 10 | 99 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++a+ +q+e++ L+++++ Lq+++R+l+Ge+L+ Ls+k+L++Le+qLe+slk iR+kK+++l+++i+e ++ +++en++L k+++ XP_028126901.1 81 PTSEAKFWQREAESLRQQLNYLQESHRQLMGEELSGLSVKDLENLESQLETSLKCIRAKKDQILTDEIKEVNHQGVIVHQENMKLFKEIN 170 467899*******************************************************************************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MGRGKTVLRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AEVGVIVISS TKRFYEFASS 60 SMRSIFERYN KGDDEHQLLS PTSEAKFWQR EAESLRQQLN YLQESHRQLM GEELSGLSVK 120 DLENLESQLE TSLKCIRAKK DQILTDEIKE VNHQGVIVHQ ENMKLFKEIN ALRKENAELQ 180 KKVYGAKDKN DINRSSHEPH DPSNGYDLHI PTCLQLCQPQ QKDGETPEKA ADLGLQLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 9e-86 | MIKC_MADS family protein |