PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028126894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 238aa MW: 27166.1 Da PI: 9.9964 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.6 | 7.9e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+s rqvtfskRrng+lKKA+ELS+LCdaev +iifsstgkly+y+s XP_028126894.1 10 RIDNSSSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGKLYDYAS 59 8***********************************************86 PP | |||||||
2 | K-box | 79.8 | 6.8e-27 | 82 | 170 | 10 | 98 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ + +q+e++ L+++++ Lq+++R+l+Ge+L+ L +k+Lq+Le+qLe slk + +K+++l+++i+el +k +q+en +L+kk+ XP_028126894.1 82 PASEVQFWQREAESLRQQLQYLQESHRQLMGEELSGLGVKDLQNLENQLEMSLKGVHVRKDQILTDEIKELNRKGGLIQQENIELNKKV 170 56889**********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MGRGKIVIRR IDNSSSRQVT FSKRRNGLLK KAKELSILCD AEVGLIIFSS TGKLYDYAST 60 SMKSVIERYN KLKEEQRQLL NPASEVQFWQ REAESLRQQL QYLQESHRQL MGEELSGLGV 120 KDLQNLENQL EMSLKGVHVR KDQILTDEIK ELNRKGGLIQ QENIELNKKV NILHHENTEL 180 HKKVYGAECV NEANRSSHVS RGLLGFNFHA PISLQLSPPQ SQKNEAPAKA MKLGLQLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-100 | MIKC_MADS family protein |