PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126894.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MIKC_MADS
Protein Properties Length: 238aa    MW: 27166.1 Da    PI: 9.9964
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.67.9e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n+s rqvtfskRrng+lKKA+ELS+LCdaev +iifsstgkly+y+s
  XP_028126894.1 10 RIDNSSSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGKLYDYAS 59
                    8***********************************************86 PP

2K-box79.86.8e-27821701098
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      +++ + +q+e++ L+++++ Lq+++R+l+Ge+L+ L +k+Lq+Le+qLe slk +  +K+++l+++i+el +k   +q+en +L+kk+
  XP_028126894.1  82 PASEVQFWQREAESLRQQLQYLQESHRQLMGEELSGLGVKDLQNLENQLEMSLKGVHVRKDQILTDEIKELNRKGGLIQQENIELNKKV 170
                     56889**********************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MGRGKIVIRR IDNSSSRQVT FSKRRNGLLK KAKELSILCD AEVGLIIFSS TGKLYDYAST  60
SMKSVIERYN KLKEEQRQLL NPASEVQFWQ REAESLRQQL QYLQESHRQL MGEELSGLGV  120
KDLQNLENQL EMSLKGVHVR KDQILTDEIK ELNRKGGLIQ QENIELNKKV NILHHENTEL  180
HKKVYGAECV NEANRSSHVS RGLLGFNFHA PISLQLSPPQ SQKNEAPAKA MKLGLQLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.11e-100MIKC_MADS family protein