PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126694.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 341aa MW: 38229.5 Da PI: 8.0277

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126694.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	163	210	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_028126694.1 163 QDHIIAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 210 5699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MEISHIRGLP EFGMDDHAFL HQWPINSIDE LNTVSLASSF EESLYHSFSH HPMFDLKPSL 60 LETSNTSVVE RPSKMPKTNS WNSSKTDHTS NSSPSQISFA NPNYATQVSN IKPKDIVVSS 120 KSISNLPSDV SASQGSFGNQ NYMFKACQGS KRIITNTRLS SNQDHIIAER KRREKLSQRF 180 IALSAIVPGL KKMDKASVLG DAIKYLKQLQ ERVKTLEEQE KKKSVESVVF VKKCEIYGEG 240 DNSSSDENFS GGPYDEPLPE IEVRFCDKNV LIRIHCERRK GVVEKTMAEI EKLHLSIINS 300 SVIAFGSSAL DITISAQMDV EFAMTLKELV KKLHAALKLF M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	174	ERKRRE
2	170	175	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-57	bHLH family protein