PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126609.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 436aa MW: 47039 Da PI: 8.5115

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.7e-25	176	219	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+C+rH+hrgr+rsrk++e XP_028126609.1 176 DPEPGRCRRTDGKKWRCSRDVVAGHKYCDRHVHRGRNRSRKPVE 219 79***************************************997 PP
2	QLQ	40	1.2e-14	92	124	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +F+ Q+q+L+ Q+l++++++a++ vPp+Ll + XP_028126609.1 92 YFSMGQWQELELQALIFRHMLAGATVPPQLLHH 124 69****************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MEFNLKQWRY QHESEEQPPS AKLPRLLQQQ QQEQEQDHHP SGSGSGSAAL PLFVVAAEHT 60 PKLTDLSAAL PSAPADSTTI TSTRFPKMGS CYFSMGQWQE LELQALIFRH MLAGATVPPQ 120 LLHHLLLKKT TTPLLNTIIS SLPPPASYFL HHPLQHYHPA LLQTGGGGYW GRGSMDPEPG 180 RCRRTDGKKW RCSRDVVAGH KYCDRHVHRG RNRSRKPVEI STTSPSSSST PSASGSNGVS 240 HGGGSGGSGG GRGGGVPQMN TALASHHTLS GGTHFDLSRP SPLIDPFHLN QRSSESRTEN 300 KGLFKAQNED GKTGAQVLRH FFDDWPRSLQ ESNNGTTNAS SSTCLSIWTP GNPSSDFSLK 360 LATGDGDEPG GHHQEGNAER ERPQLNWTGG WGSHQVAPMG GPLAEALRSS ISNSSPTSVL 420 HQLQPSSTSV TSYVTT

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MEFNLKQWRY QHESEEQPPS AKLPRLLQQQ QQEQEQDHHP SGSGSGSAAL PLFVVAAEHT  60
PKLTDLSAAL PSAPADSTTI TSTRFPKMGS CYFSMGQWQE LELQALIFRH MLAGATVPPQ  120
LLHHLLLKKT TTPLLNTIIS SLPPPASYFL HHPLQHYHPA LLQTGGGGYW GRGSMDPEPG  180
RCRRTDGKKW RCSRDVVAGH KYCDRHVHRG RNRSRKPVEI STTSPSSSST PSASGSNGVS  240
HGGGSGGSGG GRGGGVPQMN TALASHHTLS GGTHFDLSRP SPLIDPFHLN QRSSESRTEN  300
KGLFKAQNED GKTGAQVLRH FFDDWPRSLQ ESNNGTTNAS SSTCLSIWTP GNPSSDFSLK  360
LATGDGDEPG GHHQEGNAER ERPQLNWTGG WGSHQVAPMG GPLAEALRSS ISNSSPTSVL  420
HQLQPSSTSV TSYVTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-62	GRF family protein