PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028126601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | LBD | ||||||||
Protein Properties | Length: 161aa MW: 16990.4 Da PI: 8.743 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 35.2 | 3.4e-11 | 58 | 102 | 55 | 99 |
DUF260 55 edamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 ++ + sl+yeA+ r+ +P+yGa+g++++++++l+++++e++l ++ XP_028126601.1 58 PRFFGSLLYEACGRIVNPIYGAAGLLWSGNWHLCHAAVEAVLHGS 102 67889*********************************9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MDAESFAKAA AITAPYDPAY CGSKPLNPKP TPPSSSPSST AVPASKTSSM LAPITSVPRF 60 FGSLLYEACG RIVNPIYGAA GLLWSGNWHL CHAAVEAVLH GSPIVQLSPD SELSTMSPPL 120 KACDIRHVSK DESSAASRDL HKVKCRSQFK RAAGKPKVEV D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02550.1 | 2e-32 | LBD family protein |