PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126224.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 316aa    MW: 36117.8 Da    PI: 4.8839
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS249.31.5e-7691315149373
            GRAS 149 spesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvv 241
                     +p s+  + ++le++++rLa + e++++p+ef++ v     d++ ++L+v+pgEa aVn+ lqlh+ +desv ++++rd  L++vkslsPkv+++
  XP_028126224.1  91 DPVSKyaRGDSLEAVRKRLAAISEKFNIPVEFHA-VPVFGPDVTRDMLNVRPGEAQAVNFPLQLHHSPDESVVVNNPRDGHLRMVKSLSPKVITL 184
                     55555568899***********************.688899****************************************************** PP

            GRAS 242 veqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakq 336
                     veqe+++n+++F++rf+e+l+yysa+f+s++++lpr+ +eri+vE+++l+r+ivn++aceg+er+erhe ++kW++r+++aGF++++ls+++++ 
  XP_028126224.1 185 VEQESNTNTAPFFARFIETLDYYSAMFESIDVTLPRDRKERINVEKHCLARDIVNIIACEGKERVERHELFGKWKSRFTMAGFRQYSLSSYVNSV 279
                     *********************************************************************************************** PP

            GRAS 337 aklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +k+llr ++ + y++ e++g+++lgWkdr+L+s+SaW
  XP_028126224.1 280 IKSLLRCYS-EHYTLVENDGAMLLGWKDRNLISASAW 315
                     *****9999.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MAEYAAVIQQ KFLESEDEDE ETVSDNAPVV NDPAIHSARV EPLVEDLTTE LPTETGLRVE  60
LDADLDDLFA WQYQISSLRF WEVIRRACVD DPVSKYARGD SLEAVRKRLA AISEKFNIPV  120
EFHAVPVFGP DVTRDMLNVR PGEAQAVNFP LQLHHSPDES VVVNNPRDGH LRMVKSLSPK  180
VITLVEQESN TNTAPFFARF IETLDYYSAM FESIDVTLPR DRKERINVEK HCLARDIVNI  240
IACEGKERVE RHELFGKWKS RFTMAGFRQY SLSSYVNSVI KSLLRCYSEH YTLVENDGAM  300
LLGWKDRNLI SASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-102GRAS family protein