PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125975.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 24727.3 Da PI: 4.8585 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.8e-17 | 56 | 106 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+++ +g XP_028125975.1 56 PVYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFSNPEMAARAHDVAALSVKG 106 68*****998.**********843...6**********************98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MMSDAPNSET ESTSNSFSPP PSSPSSSTCL NPTTPDPNPK NRPKRNRDSN NNNKHPVYRG 60 VRMRAWGKWV SEIREPRKKS RIWLGTFSNP EMAARAHDVA ALSVKGKSAI LNFPELAPFL 120 PRPDTCSPRD VQAAAAKAAS MDHLGVPTTT SSSSSSEETE ELTEIVELPS LGTSYESAAE 180 SRGELVYVDS VVDVEEWWWL DEDHGCFAAE SSVISGGFET FLWQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-46 | ERF family protein |