PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125970.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRAS

Protein Properties

Length: 263aa MW: 29152.2 Da PI: 6.9496

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	99.2	6e-31	133	256	24	150
GRAS 24 LarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavege.ervHiiDf 117 ++ l+ l sp +p+qR+++yf+eA + l ++p++ ++ + + ++ a+kl+sevsP+++f ++t Nqa+l+a++ + +rvH+i f XP_028125970.1 133 VTVLQPLLSPVSKPFQRATFYFKEAVQLSLIP-----NPVVTPRTPTPFDGIFKMGAYKLLSEVSPLIQFMNFTSNQALLDALDDDtRRVHVIAF 222 55678889*********************9.....4445777777778******************************9989*** PP GRAS 118 disqGlQWpaLlqaLasRp.egppslRiTgvgsp 150 di+ G+QW++++q+L + +gppsl iT+++sp XP_028125970.1 223 DIGFGAQWASFMQELPGKCsRGPPSLTITAFASP 256 ************66659********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MDSNSIGSSE RLMNIAQQFR LFNTNYNPIE DPTIKDSASK AVPHELTTNS ESATNPLERI 60 RSKRAAVLIC LFEYERRDLR VILTKRPSTL STNSGNVSLP GGKTDEGDAN HVETALREAK 120 KEIGLDPSHV IVVTVLQPLL SPVSKPFQRA TFYFKEAVQL SLIPNPVVTP RTPTPFDGIF 180 KMGAYKLLSE VSPLIQFMNF TSNQALLDAL DDDTRRVHVI AFDIGFGAQW ASFMQELPGK 240 CSRGPPSLTI TAFASPFTQI EWP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00150.1	2e-27	GRAS family protein