PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125943.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | YABBY | ||||||||
Protein Properties | Length: 145aa MW: 16332.7 Da PI: 9.7978 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 179.3 | 2.3e-55 | 4 | 139 | 20 | 170 |
YABBY 20 tilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvpp 114 i+ vsvP +s++++vtvrCGhC++llsvn+ q+l+ ++ ++++ +++ + + s+s+ ++ e+ ++e pr+pp XP_028125943.1 4 RIIHVSVPCSSMLTIVTVRCGHCANLLSVNMGALLQTLPHQDL-------------QKQQFSFEDASKDSGSSSKCNKF-GAFESAEHEPPRMPP 84 6999****************************99999998873.............33333343333333333333333.335677889999999 PP YABBY 115 virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +rPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_028125943.1 85 -VRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 139 .8****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MIKRIIHVSV PCSSMLTIVT VRCGHCANLL SVNMGALLQT LPHQDLQKQQ FSFEDASKDS 60 GSSSKCNKFG AFESAEHEPP RMPPVRPPEK RQRVPSAYNR FIKEEIQRIK ASNPDISHRE 120 AFSTAAKNWA HFPHIHFGLK LDGNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 3e-51 | YABBY family protein |