PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125850.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 508aa MW: 56462.2 Da PI: 4.9157

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.8	5.6e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sws+n+nsfvv++ efa+++Lpk Fkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll+ XP_028125850.1 25 FLSKTYDMVNDPSTDSIVSWSNNNNSFVVWNVPEFARDLLPKCFKHNNFSSFVRQLNTYGFRKVDPDH---------WEFANEGFLRGQKHLLKI 110 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i r+k + XP_028125850.1 111 ISRRKPT 117 *9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MEGVQDTATM SSSAPNAIAS SPPPFLSKTY DMVNDPSTDS IVSWSNNNNS FVVWNVPEFA 60 RDLLPKCFKH NNFSSFVRQL NTYGFRKVDP DHWEFANEGF LRGQKHLLKI ISRRKPTNVH 120 SHQQSPKVQD KPVGSCFEVE KFGHEEEIEK LKRDKNVLVQ ELVRLRQQQQ ATDHQLQAVG 180 QRVQVMEQRQ QHTMSFLAKA MQSPGFLAQL VEQKNESNRR ISGVNKKRRL PNQEEESNSV 240 GKHDTASPDG QIVKYQPLMN EAAKAMLRQI SKMNASPRLE STFSGPSGFL IDNIPSPPQA 300 LDRGNTSNRV SGVTLSEVLP ISSESYLSTE LGMPVSCPSP AVSEIQSSPC VTSGPAKVAQ 360 FPEMIINTQE DTVLPNFSQV QEIMPESTVE VSDLNSGTGN TGFIDSMSGF IDGSMPAVTD 420 DFSSDTDVDI MLDDIPKLPG INDVFWEQFL SVSPLTRDTD EINSNTLECC IGKELDRQTG 480 WDSGWDKTQH MIHLTEQMGL LAAEANRG

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MEGVQDTATM SSSAPNAIAS SPPPFLSKTY DMVNDPSTDS IVSWSNNNNS FVVWNVPEFA  60
RDLLPKCFKH NNFSSFVRQL NTYGFRKVDP DHWEFANEGF LRGQKHLLKI ISRRKPTNVH  120
SHQQSPKVQD KPVGSCFEVE KFGHEEEIEK LKRDKNVLVQ ELVRLRQQQQ ATDHQLQAVG  180
QRVQVMEQRQ QHTMSFLAKA MQSPGFLAQL VEQKNESNRR ISGVNKKRRL PNQEEESNSV  240
GKHDTASPDG QIVKYQPLMN EAAKAMLRQI SKMNASPRLE STFSGPSGFL IDNIPSPPQA  300
LDRGNTSNRV SGVTLSEVLP ISSESYLSTE LGMPVSCPSP AVSEIQSSPC VTSGPAKVAQ  360
FPEMIINTQE DTVLPNFSQV QEIMPESTVE VSDLNSGTGN TGFIDSMSGF IDGSMPAVTD  420
DFSSDTDVDI MLDDIPKLPG INDVFWEQFL SVSPLTRDTD EINSNTLECC IGKELDRQTG  480
WDSGWDKTQH MIHLTEQMGL LAAEANRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-111	HSF family protein