PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125751.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 374aa MW: 43319 Da PI: 7.3058

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.7	4.6e-24	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ ++++r+e rtgC+a+l++k ++ +k v++++++HnH ++ XP_028125751.1 31 DFYNTYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVNKRD-PLTKNPRQEVRTGCQARLVIKWDRnIQKNFVSDFVEQHNHIFV 119 6******************9.6666*************999.999**************99988999*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKEGQITSR 60 QFVCNKEGFR VVNKRDPLTK NPRQEVRTGC QARLVIKWDR NIQKNFVSDF VEQHNHIFVP 120 AECTHMLPSQ RKISASQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR 180 TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNDEQ ITNIFWADAQ MIMDYGQFGD 240 VVTFDTTYKL NSAHRPFASF VGLNHHRETM VFGAALMYDE TADSFVWLFR RFLEAMSSKA 300 PKTIFTDQDA AMAKAIPIVM PNTTHRLCTW HLMQNALRHA NSIFKDKAMK DKGMKSVLYT 360 FMYDIEDEEE FMLK

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVNKRDPLTK NPRQEVRTGC QARLVIKWDR NIQKNFVSDF VEQHNHIFVP  120
AECTHMLPSQ RKISASQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNDEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFASF VGLNHHRETM VFGAALMYDE TADSFVWLFR RFLEAMSSKA  300
PKTIFTDQDA AMAKAIPIVM PNTTHRLCTW HLMQNALRHA NSIFKDKAMK DKGMKSVLYT  360
FMYDIEDEEE FMLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-87	FAR1 family protein