PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028125520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 27433.9 Da PI: 5.9791 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.3 | 5.7e-08 | 170 | 197 | 4 | 31 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 4 ahnerErrRRdriNsafeeLrellPkas 31 +h+ +Er RR++iN+++ +L+ ++P ++ XP_028125520.1 170 KHSLAERVRREKINNRLKRLQIIVPGCY 197 79***********************974 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MDDFRQQQLE SFSPSYAASY TDMKYMEIMD HLTEPNSTMF ENFNMTDMLE ESFMVDHQQP 60 EIQGTNFKIL PCTFESNCMN TVPVFLDMAT SSNTEDVFHE KKKRKVMEQS SSNSINMSST 120 VPGNGWKVKN DTMKKNSSGK GKKSMDYEKE ADESEEVIHV KARRGKATDK HSLAERVRRE 180 KINNRLKRLQ IIVPGCYKNQ VEFLSMELAA ASSLYDFNLD AEVISNSAGD KIHMRQGSW |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 101 | 106 | KKKRKV |
2 | 101 | 129 | KKKRKVMEQSSSNSINMSSTVPGNGWKVK |
3 | 102 | 130 | KKKRKVMEQSSSNSINMSSTVPGNGWKVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G25330.1 | 8e-27 | bHLH family protein |