PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125159.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 412aa MW: 46187.2 Da PI: 6.2801

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.6	1.8e-07	351	383	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_028125159.1 351 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 383 59*****************************87 PP
2	ELK	28.9	2.7e-10	304	325	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_028125159.1 304 ELKHELKQGYKEKIVDIREEIL 325 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MAFHDHLSQE MALQHFADQH LADNTAVLRG MLPDQLHHSS SDAPGKHSAG APTWLNSSIL 60 RQQSHNHHYG GGDGSFLHLQ TTITNSDSSA SNQWLSRSIH GENDDVPEIA AAAMNQEKKA 120 SRQSESDGSG EETNWQSAKC KADILNHPLY EQLLSAHVQC LRIATPINEL PRIDAQLALS 180 QHAVAKYSVL GHGNQPLDDK DLDQFMTHYV LLLSSFKEQL QQHVRVHAME AVMACWDLEQ 240 SLRSLTGVAP VEGTGATMSD DDDDQADSDT NLFDGSLDGP DSMGFGPLVP TETERSLMER 300 VRQELKHELK QGYKEKIVDI REEILRKRRA GKLPGDTTSL LKAWWQSHSK WPYPTEEDKA 360 RLVQETGLQL KQINNWFINQ RKRNWHNNPS SSTAPKSKRK SNAGETSNER FM

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MAFHDHLSQE MALQHFADQH LADNTAVLRG MLPDQLHHSS SDAPGKHSAG APTWLNSSIL  60
RQQSHNHHYG GGDGSFLHLQ TTITNSDSSA SNQWLSRSIH GENDDVPEIA AAAMNQEKKA  120
SRQSESDGSG EETNWQSAKC KADILNHPLY EQLLSAHVQC LRIATPINEL PRIDAQLALS  180
QHAVAKYSVL GHGNQPLDDK DLDQFMTHYV LLLSSFKEQL QQHVRVHAME AVMACWDLEQ  240
SLRSLTGVAP VEGTGATMSD DDDDQADSDT NLFDGSLDGP DSMGFGPLVP TETERSLMER  300
VRQELKHELK QGYKEKIVDI REEILRKRRA GKLPGDTTSL LKAWWQSHSK WPYPTEEDKA  360
RLVQETGLQL KQINNWFINQ RKRNWHNNPS SSTAPKSKRK SNAGETSNER FM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-170	TALE family protein