PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125074.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 192aa MW: 21654.8 Da PI: 6.504 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.4 | 1.7e-29 | 104 | 162 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYG+K+vk++++pr+YY+C+s gC+vkk+ver++ed ++v++tY g Hnhe XP_028125074.1 104 MDDGFKWRKYGKKMVKNTPYPRNYYKCSSGGCNVKKRVERDREDSSYVITTYDGVHNHE 162 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MDSNNHHPQN PNPNLTCTYQ NTEFFDTLPD FELSDYLMLE DGTEGDLSSQ NVTSSDNVTG 60 GSVESAGATS TNSNIKCRTG VKRNKPDQAD FRVAFRTKSE LEIMDDGFKW RKYGKKMVKN 120 TPYPRNYYKC SSGGCNVKKR VERDREDSSY VITTYDGVHN HESPCVVYYN HTPLMVPHGW 180 TLQPSSSQSS PS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 9e-43 | WRKY family protein |