PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124803.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 1015aa MW: 111412 Da PI: 4.6909

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.8e-18	38	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_028124803.1 38 KGQWTAEEDDILCKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84 799**************************9.**********986 PP
2	Myb_DNA-binding	59.4	7.7e-19	90	136	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ede++v++v ++G++ W+tIa++++ gR +kqc++rw+++l XP_028124803.1 90 KGPWSKGEDEIIVELVDKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136 79****************************.***********97 PP
3	Myb_DNA-binding	49	1.4e-15	142	184	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l+ a++ +G++ W+ + ++ gRt++++k++w+ XP_028124803.1 142 KEAWTQEEELTLISAHQIYGNK-WAELTKFLP-GRTDNSIKNHWN 184 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1015 aa Download sequence
MMESDRTNST PSDGGTDGLQ RMRSLHGRTS GPTRRSTKGQ WTAEEDDILC KAVQRFKGKN 60 WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKGEDEI IVELVDKYGP KKWSTIAQHL 120 PGRIGKQCRE RWHNHLNPNI SKEAWTQEEE LTLISAHQIY GNKWAELTKF LPGRTDNSIK 180 NHWNSSVKKK LDSYLASGLL AQFQGLPHVS YPNQSIPSSS STMPLSSGDD SVPKDGTEAE 240 EISECSQGST VVGCSQSTSD MPNAVAHTRE ECRLTEESGH GKEDPSFSPA SCSENYHTAF 300 QEVAFCMPEV PCDFGGSSNY LEQNYTPGWG SYAGKDWQLN SNESSEFLMH CIGGNENPEV 360 VPFQLQTSVG LNVSPSVGNL VLGSGDPEHM LIHEDGCCRV IYPEAEMDGY FSSTKCSDIM 420 DFNESADSLL YQPSNYQLPD PPKSDMLGTL CSQPFDVQSQ LPPDDSALFF GSDPNQFNDL 480 SHGNEEEELA KSPNDDFIYA NDSNNSPGNN GKDNMGQQDE PDQARNSLKL VPVDAFSSGP 540 SNNIQSHSSL EENPIVPTEQ QETGALFYEP PRFPSLDIPF FSCDLIQSGT DMQQEYSPLG 600 IRQLMMSSMN CFTPFRLWDS PLRDDSPDAV LKSAAKTFTG TPSILKKRNR DLASPMSEKR 660 SEKKLESGMN QESFSSLARD FSRLDVMLDG NGNPKAPLLS PAPNQKGESG NSTSNKENSS 720 HALEAGKEEG RDAKTKGDLD AATKNVQQAS AVLVEHNMND LLFFSPDRYE DRALGTSIRT 780 LGIQCSRRLE TTSNQVALSE SSSGNPCSSI VSSPTVSGRK DKSRLVAAVS AQSVPASNPL 840 EIMAGSSGND AGVENLCVFG ETPFKRSIES PSAWKSPWFI NSFLPGPRID TDITIEDIGY 900 FMSPGDRSYD AIGLMKQLSE HTAAAFADAQ EVLGDETPET ILKQRRSNNQ KLDLENCALN 960 SQPDNHSLLA SNVPTERRVL DFSECGTPGK GKESGKFSTV TILSSPSSYL LKGCR

Sequence ? help Back to Top

Protein Sequence Length: 1015 aa Download sequence

MMESDRTNST PSDGGTDGLQ RMRSLHGRTS GPTRRSTKGQ WTAEEDDILC KAVQRFKGKN  60
WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKGEDEI IVELVDKYGP KKWSTIAQHL  120
PGRIGKQCRE RWHNHLNPNI SKEAWTQEEE LTLISAHQIY GNKWAELTKF LPGRTDNSIK  180
NHWNSSVKKK LDSYLASGLL AQFQGLPHVS YPNQSIPSSS STMPLSSGDD SVPKDGTEAE  240
EISECSQGST VVGCSQSTSD MPNAVAHTRE ECRLTEESGH GKEDPSFSPA SCSENYHTAF  300
QEVAFCMPEV PCDFGGSSNY LEQNYTPGWG SYAGKDWQLN SNESSEFLMH CIGGNENPEV  360
VPFQLQTSVG LNVSPSVGNL VLGSGDPEHM LIHEDGCCRV IYPEAEMDGY FSSTKCSDIM  420
DFNESADSLL YQPSNYQLPD PPKSDMLGTL CSQPFDVQSQ LPPDDSALFF GSDPNQFNDL  480
SHGNEEEELA KSPNDDFIYA NDSNNSPGNN GKDNMGQQDE PDQARNSLKL VPVDAFSSGP  540
SNNIQSHSSL EENPIVPTEQ QETGALFYEP PRFPSLDIPF FSCDLIQSGT DMQQEYSPLG  600
IRQLMMSSMN CFTPFRLWDS PLRDDSPDAV LKSAAKTFTG TPSILKKRNR DLASPMSEKR  660
SEKKLESGMN QESFSSLARD FSRLDVMLDG NGNPKAPLLS PAPNQKGESG NSTSNKENSS  720
HALEAGKEEG RDAKTKGDLD AATKNVQQAS AVLVEHNMND LLFFSPDRYE DRALGTSIRT  780
LGIQCSRRLE TTSNQVALSE SSSGNPCSSI VSSPTVSGRK DKSRLVAAVS AQSVPASNPL  840
EIMAGSSGND AGVENLCVFG ETPFKRSIES PSAWKSPWFI NSFLPGPRID TDITIEDIGY  900
FMSPGDRSYD AIGLMKQLSE HTAAAFADAQ EVLGDETPET ILKQRRSNNQ KLDLENCALN  960
SQPDNHSLLA SNVPTERRVL DFSECGTPGK GKESGKFSTV TILSSPSSYL LKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein