PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028124651.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 760aa    MW: 86491.6 Da    PI: 7.5743
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028124651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS376.33.8e-1153847551374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+++d +  ++lL+++++++sp gd +qRla++f+++L+arla+++s++yka+ +++ts    ++ l+a++l+   +P+ k+s+
  XP_028124651.1 384 LRTLLIHCAQAVAADDRRSSNELLKQIRQHSSPWGDGNQRLAHCFANGLEARLAGTGSQIYKAFVSRRTS---AADYLKAYHLYLASCPFRKISN 475
                     6789***************************************************************999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++ N++I    +++ r+HiiDf+i +G+QWp+++q +a+R++gpp++RiTg++ p++g   +  +eetg+rLa++A++++vpfe+n+ +akr+++
  XP_028124651.1 476 FVSNRTITVKSKSAMRLHIIDFGILYGFQWPTFIQRIAARDGGPPKIRITGIEFPQPGfrPAAGVEETGRRLADYAQTFNVPFEYNA-IAKRWDS 569
                     *********************************************************9*9***************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+++++E l+Vn+ ++ ++l+de+v ++s r+ v++l+++++P+++++   +   +++ F++rf eal ++salfd+le+++pre++er+
  XP_028124651.1 570 IKLEDLKIDRDEFLVVNCLYRSKNLHDETVLVDSSRNIVINLIRRINPDLFIHGIVNGAFSAPFFVTRFREALFHFSALFDMLETNVPREHHERM 664
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Ere++g+e+ nv+aceg er+er et+++W+ r  +aGF ++p++ +++k a   +r+++ + + ++e++++l++gWk+r+++++S+W+
  XP_028124651.1 665 LIEREIFGKEALNVIACEGWERVERPETYKQWQVRNLRAGFMQIPFDRDIMKRAIEKVRNHYHKDFVIDEDNQWLLQGWKGRTIYALSCWK 755
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    
MIMDPRLHGF SGSMNGIPLG NQSVAFSSDQ IQVGESRFRR NTFVNHKFGG IPVQPNDPSS  60
SSNVIPSSTV TLEEDPVEDC DFSDAVLTYI SQILMEEDME DKSCMLQESL DLQAAEKPFY  120
DVLGKKYPPS PEQNPIYVDQ NSESPDDCLS RNHSNCLSSS SNSSDYLVYP SWINNQADYS  180
TSQIRSPPVY DNNPSHSSVT SSNSVNKNID GFMDSPISPL QVTDLYSGNQ SIWQFRKGVE  240
EARKFLPTSN GMFINFGVNG LSPQEPKGET SEVVKVEEKK EKEYLPNESR GRKNPHREKV  300
DLEEEEERST KQPAVYPEST LRSEMFDTVL LCSMGKGEAA LIAYRKALKD GTSKKTQQNG  360
QLKGPPSRKG RGKKQNRKKE VVDLRTLLIH CAQAVAADDR RSSNELLKQI RQHSSPWGDG  420
NQRLAHCFAN GLEARLAGTG SQIYKAFVSR RTSAADYLKA YHLYLASCPF RKISNFVSNR  480
TITVKSKSAM RLHIIDFGIL YGFQWPTFIQ RIAARDGGPP KIRITGIEFP QPGFRPAAGV  540
EETGRRLADY AQTFNVPFEY NAIAKRWDSI KLEDLKIDRD EFLVVNCLYR SKNLHDETVL  600
VDSSRNIVIN LIRRINPDLF IHGIVNGAFS APFFVTRFRE ALFHFSALFD MLETNVPREH  660
HERMLIEREI FGKEALNVIA CEGWERVERP ETYKQWQVRN LRAGFMQIPF DRDIMKRAIE  720
KVRNHYHKDF VIDEDNQWLL QGWKGRTIYA LSCWKPISET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein