PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124371.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 666aa MW: 77357.7 Da PI: 6.4698

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.2	4.8e-12	59	110	38	89
FAR1 38 egkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 eg re++k+ + +++r+etrt+Cka ++++ ++ +kw v+k++++HnH+l XP_028124371.1 59 EGDREKDKRY-TMIKNPRSETRTNCKAFMHISFKRdLSKWIVSKFDSNHNHPL 110 6888888888.999****************999799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MEDSIMDDGG LEGCIEEMGE LAKDKSPYLG MEFPSEEAAY EFIMNTEELW GLVLEEIIEG 60 DREKDKRYTM IKNPRSETRT NCKAFMHISF KRDLSKWIVS KFDSNHNHPL HLPQCTHLMP 120 SQRKVYDAQG INIDIADESG ISLKASHDLI SAIAGGKEFV GFTREDQKTY LRAKRQRNLQ 180 YGEAGSLLRY FQQQVAENPY FYYAIKLDVD EMITNIFWAD HQMITDYGLF GDAVSFDTTF 240 RTNKEYRPLA LFCGFNHFRM TVIFGAALLY DETAESFEWL FETFLDAMSG KKPVSFFTDQ 300 DQAMAKAISQ IMPEVFHGLC TFHLMQNALK HLGYLFKSGS KFSSDLKACI YDYENEHELI 360 ETWNSLIDKY NLQENEWMKR TWRKREQWAH VYMKWVFTGG MRSTQLSESL NGTLRGYLKG 420 DHNIVQFFTH FNRIVVDERY EEISTIYDSR QKLQIMKLKK SPILIQVASL YTPPIFDLFD 480 CELDTSLCCQ VKQFHELKGE IKCVIGLYGN GKEYIVEGRV EVIGLRGEKS CREIHCTCQW 540 RLDAKDCEVE KKNVIVDEND PKLFILARYR DLCPRMVKLA TQASMHKPAY QLVDEGIKEL 600 CVKVNNMMKG VGSFGTNELD VDDPNITQVK GIKKKDVGHK EMSRLKPWCK MMNKKTKVIY 660 FTTYPP

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MEDSIMDDGG LEGCIEEMGE LAKDKSPYLG MEFPSEEAAY EFIMNTEELW GLVLEEIIEG  60
DREKDKRYTM IKNPRSETRT NCKAFMHISF KRDLSKWIVS KFDSNHNHPL HLPQCTHLMP  120
SQRKVYDAQG INIDIADESG ISLKASHDLI SAIAGGKEFV GFTREDQKTY LRAKRQRNLQ  180
YGEAGSLLRY FQQQVAENPY FYYAIKLDVD EMITNIFWAD HQMITDYGLF GDAVSFDTTF  240
RTNKEYRPLA LFCGFNHFRM TVIFGAALLY DETAESFEWL FETFLDAMSG KKPVSFFTDQ  300
DQAMAKAISQ IMPEVFHGLC TFHLMQNALK HLGYLFKSGS KFSSDLKACI YDYENEHELI  360
ETWNSLIDKY NLQENEWMKR TWRKREQWAH VYMKWVFTGG MRSTQLSESL NGTLRGYLKG  420
DHNIVQFFTH FNRIVVDERY EEISTIYDSR QKLQIMKLKK SPILIQVASL YTPPIFDLFD  480
CELDTSLCCQ VKQFHELKGE IKCVIGLYGN GKEYIVEGRV EVIGLRGEKS CREIHCTCQW  540
RLDAKDCEVE KKNVIVDEND PKLFILARYR DLCPRMVKLA TQASMHKPAY QLVDEGIKEL  600
CVKVNNMMKG VGSFGTNELD VDDPNITQVK GIKKKDVGHK EMSRLKPWCK MMNKKTKVIY  660
FTTYPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-89	FAR1 family protein