PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124086.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 355aa MW: 40479.2 Da PI: 6.5095

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.1	4.2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d++++ G g+W+t ++ g+ R++k+c++rw +yl XP_028124086.1 14 KGPWTPEEDQKLIDYIQKNGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.7	4.6e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_028124086.1 67 RGRFSFEEEETIIQLHIILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MGRTPCCEKN GLKKGPWTPE EDQKLIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHIILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DFLDISSILG SSFYNNSSQM NLSRFLGVQT PLLNPELLRI ATSLLTSHRE 180 NPNLILQNVQ ENQLCYPQVQ NQMPQLVQPN QLQTLIDQEI PTCNIPFPNE AQLMEPNVDQ 240 FSSNFTNFSS QNCQLNDWQS NGMASNLGED YMSLPNYEYY GSDQSIIENP NPSENSKFQS 300 NNSNNFSFAS VLSTMSTRSS SPAPLNSNST YINSGSTTTT TEDERESYCS GMLKF

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MGRTPCCEKN GLKKGPWTPE EDQKLIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHIILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DFLDISSILG SSFYNNSSQM NLSRFLGVQT PLLNPELLRI ATSLLTSHRE  180
NPNLILQNVQ ENQLCYPQVQ NQMPQLVQPN QLQTLIDQEI PTCNIPFPNE AQLMEPNVDQ  240
FSSNFTNFSS QNCQLNDWQS NGMASNLGED YMSLPNYEYY GSDQSIIENP NPSENSKFQS  300
NNSNNFSFAS VLSTMSTRSS SPAPLNSNST YINSGSTTTT TEDERESYCS GMLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-116	MYB family protein