PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123886.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 472aa MW: 52893.1 Da PI: 7.1111

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	96	5.8e-30	46	213	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+ ++++ +ik +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_028123886.1 46 LPAGVKFDPTDQELI-EHLEAKVDAKDskshplIDEFIpTIKGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 138 799**********.99**9996665543333334776646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy.............k..............grapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y + + + k+ekt+Wvmh+y+l XP_028123886.1 139 ETRWHKTGKTRPVMA-NGRQKGCKKILVLYtnfgknrssiieyNirsskfhlkpclgcACQWKPEKTNWVMHQYHL 213 778********.999*******77777666655550555666666666556777888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MNTSQLGSIS SSDLIDAKLE EHQLCGSKQC PGCGHKLEGK PDWVGLPAGV KFDPTDQELI 60 EHLEAKVDAK DSKSHPLIDE FIPTIKGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMANGRQKGC KKILVLYTNF GKNRSSIIEY 180 NIRSSKFHLK PCLGCACQWK PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW 240 SDRSGAAAAG EGNSTEPNSR RGESGSCSLK ELEVITQRDE LSAVGVGVGA AMSSYSAIDI 300 QQLKADHFSY APFRKSFDEA RVGEASTTRE ASASGTCEEH NLHELQRPRH AIHEQQQQQH 360 QHHQIASTAF HISRPSLPIS TIISPPPLHH TSIILDEDSF HVSRIMLQNE NFQQQQHHKL 420 GGRSASGLEE LIMGCTSNAA DMKQESSMTN PQEAEWLKYS FWPDPDNPDH HG

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MNTSQLGSIS SSDLIDAKLE EHQLCGSKQC PGCGHKLEGK PDWVGLPAGV KFDPTDQELI  60
EHLEAKVDAK DSKSHPLIDE FIPTIKGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMANGRQKGC KKILVLYTNF GKNRSSIIEY  180
NIRSSKFHLK PCLGCACQWK PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW  240
SDRSGAAAAG EGNSTEPNSR RGESGSCSLK ELEVITQRDE LSAVGVGVGA AMSSYSAIDI  300
QQLKADHFSY APFRKSFDEA RVGEASTTRE ASASGTCEEH NLHELQRPRH AIHEQQQQQH  360
QHHQIASTAF HISRPSLPIS TIISPPPLHH TSIILDEDSF HVSRIMLQNE NFQQQQHHKL  420
GGRSASGLEE LIMGCTSNAA DMKQESSMTN PQEAEWLKYS FWPDPDNPDH HG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-169	NAC family protein