PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028123872.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 300aa    MW: 32839.8 Da    PI: 10.2666
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028123872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.51.1e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l  +v ++G g W+tI +          R+  ++k++w++
   XP_028123872.1  5 KQKWTPEEEAALRAGVVKHGAGKWRTILKDPEfsgvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGAPKQKWTP EEEAALRAGV VKHGAGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMA  60
NGWGSREKAR LALKRMRPAP KEDENAMALS TVVQSDEEIV DAKPLAVSSG SPQIGAPKRS  120
IIRLDNLIME AINNLKEPGG SNKTTIATYI EEQYWAPANF KRLLSAKLKF LTASGKLIKM  180
KRKFRIAPPL ALSDKRRNSS TLLLEGRQRA SPKIDKDDIN ILNKAQVDLE LAKMRSMTPQ  240
EAAVAAAQAV AEAEAAIAEA EEAAREAEAA EADAEAAQAF AEAAMKTLQG RNTPRTMVHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-105MYB_related family protein