PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123185.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 334aa MW: 37157.6 Da PI: 8.2138

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.9	2e-06	173	192	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C+k+F+r nL+ H+ XP_028123185.1 173 FSCPLCSKTFNRYNNLQMHM 192 89*****************9 PP
2	zf-C2H2	17.1	1.5e-05	257	279	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk+F k + ++H +++ XP_028123185.1 257 FTCTKCGKPFAVKGDWRTHEKNC 279 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MTEPYSNFFT GWFNFLPLHY PHYSSSYSNP SSSYPPQSHN LYSNNNKSSI RSQISPPSPP 60 TLVALPLLNN LSTAAQDHHE SSSCSATASA SASASAMELD DKIKSRDADD ESVTVALHIG 120 LPSPSPSSDL VSPSEVTKNE GVHVVSGYPL NKLNKDPYWI PTPSQILIGP TQFSCPLCSK 180 TFNRYNNLQM HMWGHGSQYR KGPESLRGIQ PTAMLRLPCY CCAPGCKYNT DHPRSRPLKD 240 FRTLQTHYKR KHGTKPFTCT KCGKPFAVKG DWRTHEKNCG KIWYCICGSD FKHKRSLKDH 300 IKAFGCGHGA FDSKCLEDQD EPTSEIDQDG ESSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-112	C2H2 family protein