PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123113.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 349aa MW: 39268.5 Da PI: 7.3035

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102.2	8.8e-32	50	187	2	120
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLq++LG+ ++sk ++WLl++ak++i+el+ ++ ++ ++ ++++ ++++++g XP_028123113.1 50 FGGKDRHSKVCTMRGLRDRRVRLSVPTAIQLYDLQERLGLNQPSKVVDWLLNEAKHEIDELPPLQMPPGNFKfGQNHQPMITNHDKEGlkignni 144 689*************************************************************9888877753333333333333336677777 PP TCP 89 ..............kaaksaakskksqksaasalnlakesrakara 120 + s+a+ ++++k+ ++ + ke ++ ++ XP_028123113.1 145 nwdtplglqgssfwN---SNATLNDKSKEVSTETPVEKENWNQRNE 187 777777776653320...2223333333333222333322222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MITTSREEDL TTKQEGNTVD GKNNSKASCS SKTPWSKLNN PRIVRVSRAF GGKDRHSKVC 60 TMRGLRDRRV RLSVPTAIQL YDLQERLGLN QPSKVVDWLL NEAKHEIDEL PPLQMPPGNF 120 KFGQNHQPMI TNHDKEGLKI GNNINWDTPL GLQGSSFWNS NATLNDKSKE VSTETPVEKE 180 NWNQRNEEEK QDNLNEANGG NVSSNNFFPR PTYSSIPDLL NNFAPYNSFY RWDPPKFSLS 240 HIRSHGYTST TQTEDIQDFN VVPFPPSLSL PSGSQVLVCP PGTAQSHFPS NIEFDPKQIN 300 HFQTLSSSSQ NPLSNSMGQS MRPLHLSMLI QSRDSSGSQS NNNDEFPPK

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MITTSREEDL TTKQEGNTVD GKNNSKASCS SKTPWSKLNN PRIVRVSRAF GGKDRHSKVC  60
TMRGLRDRRV RLSVPTAIQL YDLQERLGLN QPSKVVDWLL NEAKHEIDEL PPLQMPPGNF  120
KFGQNHQPMI TNHDKEGLKI GNNINWDTPL GLQGSSFWNS NATLNDKSKE VSTETPVEKE  180
NWNQRNEEEK QDNLNEANGG NVSSNNFFPR PTYSSIPDLL NNFAPYNSFY RWDPPKFSLS  240
HIRSHGYTST TQTEDIQDFN VVPFPPSLSL PSGSQVLVCP PGTAQSHFPS NIEFDPKQIN  300
HFQTLSSSSQ NPLSNSMGQS MRPLHLSMLI QSRDSSGSQS NNNDEFPPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	8e-49	TCP family protein