PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123083.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 909aa MW: 99937.7 Da PI: 8.1119

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	6e-19	337	436	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ ++++ + l+++d++g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_028123083.1 337 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPDGLPLKVQDSKGKEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDVVTFSRIE-PEGK 429 89************************555566778***********99899999999.*******************987.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_028123083.1 430 LVMGFRK 436 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 909 aa Download sequence
MSSSSSLKNC FNSNCKEVLE RSRKGWRRRT GEFADLCDRC ALAYEEGKFC ETFHLDASGW 60 RCCESCGKQI HCGCIVSFHM FVLLDAGGIE CITCARKSFI LTPNPAWPPP SLFLPVMPER 120 IKDLSTKTWR QMAGSGPVPW RQAPSLFSSS AAQSDLQPRM PFEVHIPSGI DRLVSSERPS 180 ASSLEKKKVD DSSARLMNGT LKLGTSETLE NGNAGINCGE QANPCVNVPQ KLTFSKNDTS 240 GSHYSLAVSS VPPNVANDQT KASGTHAPRP TPPPLIGKQF CGHDGADSSG ETQIRNRRPR 300 GDARSRNQLL PRYWPRITDQ ELQQISGDSN SVITPLFEKM LSASDAGRIG RLVLPKKCAE 360 AYFPPISQPD GLPLKVQDSK GKEWMFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDVVT 420 FSRIEPEGKL VMGFRKASIA PPSDQGCETV NASNGVAMNG NINAKKSKPG EVLLTHQLKG 480 HSVSPGFSSI NQTIPADQAI PWPKHDKSGC LAKGAKSSFR GKRKNSTLGS KSKRLRIENE 540 DLIELKLTWK QAQGLLRPPP NHLPSVMVIE GFEFEEYEQD APIIGRPTIF ATDHKGEKIQ 600 WAQCEDCFKW RKVPPDAFLP SRWTCSENWW DPERSVCSVV QELTAEQLED LVATSTQAAA 660 KKMKVAKQDP DSVEALEGLD ALANLAIQEE GEALPTSSQA TTKHPRHRPG CTCIVCIQPP 720 SGKGPKHKQT CTCNVCLTVK RRFQTLLLRR EKKQSEKEAE TARQNQQPHP HLPEKSPDDE 780 TLLCTNTGSS SPNQKMANRD DPEDDPSKMR STLSPFKGQI DLNIQPERDE ELSPGSDSGG 840 VTRLIQDATE SYLRQQRLSN SNRNSAGNQA QMNFGNGSIA TVSSHGEAEA ECSVPLSTNA 900 SASTSGTER

Sequence ? help Back to Top

Protein Sequence Length: 909 aa Download sequence

MSSSSSLKNC FNSNCKEVLE RSRKGWRRRT GEFADLCDRC ALAYEEGKFC ETFHLDASGW  60
RCCESCGKQI HCGCIVSFHM FVLLDAGGIE CITCARKSFI LTPNPAWPPP SLFLPVMPER  120
IKDLSTKTWR QMAGSGPVPW RQAPSLFSSS AAQSDLQPRM PFEVHIPSGI DRLVSSERPS  180
ASSLEKKKVD DSSARLMNGT LKLGTSETLE NGNAGINCGE QANPCVNVPQ KLTFSKNDTS  240
GSHYSLAVSS VPPNVANDQT KASGTHAPRP TPPPLIGKQF CGHDGADSSG ETQIRNRRPR  300
GDARSRNQLL PRYWPRITDQ ELQQISGDSN SVITPLFEKM LSASDAGRIG RLVLPKKCAE  360
AYFPPISQPD GLPLKVQDSK GKEWMFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDVVT  420
FSRIEPEGKL VMGFRKASIA PPSDQGCETV NASNGVAMNG NINAKKSKPG EVLLTHQLKG  480
HSVSPGFSSI NQTIPADQAI PWPKHDKSGC LAKGAKSSFR GKRKNSTLGS KSKRLRIENE  540
DLIELKLTWK QAQGLLRPPP NHLPSVMVIE GFEFEEYEQD APIIGRPTIF ATDHKGEKIQ  600
WAQCEDCFKW RKVPPDAFLP SRWTCSENWW DPERSVCSVV QELTAEQLED LVATSTQAAA  660
KKMKVAKQDP DSVEALEGLD ALANLAIQEE GEALPTSSQA TTKHPRHRPG CTCIVCIQPP  720
SGKGPKHKQT CTCNVCLTVK RRFQTLLLRR EKKQSEKEAE TARQNQQPHP HLPEKSPDDE  780
TLLCTNTGSS SPNQKMANRD DPEDDPSKMR STLSPFKGQI DLNIQPERDE ELSPGSDSGG  840
VTRLIQDATE SYLRQQRLSN SNRNSAGNQA QMNFGNGSIA TVSSHGEAEA ECSVPLSTNA  900
SASTSGTER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	1e-161	B3 family protein