PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028122921.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 32898.9 Da PI: 5.89 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.9 | 4.7e-13 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+ +++ g+ R++k+c++rw +yl XP_028122921.1 14 RGPWTIEEDHKLMNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++ E+ ++++++++lG++ W++Ia++++ gRt++++k++w++ XP_028122921.1 67 RGEFSEAEENQIIQLHARLGNR-WSKIASHFP-GRTDNEIKNHWNT 110 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MGRQPCCDKV GLKRGPWTIE EDHKLMNFIL NNGIHCWRMV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGEF SEAEENQIIQ LHARLGNRWS KIASHFPGRT DNEIKNHWNT RIKKRLKMLG 120 LDPVTHKPME QNEKVDVQKT ETITTDFDSS KEEEERLGVT VTMSEKHTKN HAEFVETREK 180 QNDKVDMAFD ETTNDLLRSY ELMLCRSLDD GGLLNTTTTT STTSNSNYNP SFSLEDSLNP 240 SCMGESSSSI QEDSIQRWVD SVNSMLSWDS FNQLDEGLFF SENVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 9e-85 | MYB family protein |