PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028122841.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 210aa MW: 24386.6 Da PI: 9.8794 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 72.8 | 7.6e-23 | 48 | 133 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ +s+ks+r+g+i++r + C + +++++++ + ++r r gC+a++ vk+ek g+w+v k++ +HnH+l+ XP_028122841.1 48 FYDEYATRVGFVTRVLSSRKSERDGSIISRGLGCRASPENQNSERV---TLQKRDRRREGCTAMILVKREKPGRWVVRKFVRDHNHPLV 133 **********************************999999888777...78888999******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MDGQTQMDDE AGRIETSMGG ELSSCESHRN QEPYEGMLFD SEEAARTFYD EYATRVGFVT 60 RVLSSRKSER DGSIISRGLG CRASPENQNS ERVTLQKRDR RREGCTAMIL VKREKPGRWV 120 VRKFVRDHNH PLVVSLPNRR PTHDEKDKKI QELTAELRVK KRLSGAYRDQ LLSLMKDVEN 180 HNEHLSTKVQ VVRNNLKELE AKRKELLLHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 3e-54 | FAR1 family protein |