PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122614.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 326aa    MW: 36031 Da    PI: 6.2371
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.43.5e-154291255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+  E+rRR++iN++f+ Lrel+P++    ++K + a+ L +++e++++Lq
  XP_028122614.1 42 RSKHSVTEQRRRSKINERFQLLRELIPHS----DQKRDTASFLLEVIEHVQYLQ 91
                    899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MKSAKLHQDE EEDVDEEFVS HKETPSSNNK DCKNNDKATA TRSKHSVTEQ RRRSKINERF  60
QLLRELIPHS DQKRDTASFL LEVIEHVQYL QEKVQKYEGS YQGWSLEPTK LMPWRNSHWR  120
VQSFGGHPQA IKNGSDPGST FAGSFNENNI TISPTPHPNQ LNTIASDSSR DLSGKTVGQQ  180
PELANKSLAM PMTLQASVPA HIQGDGVLPH PLQRSISDTQ STEIMSDALN QPEELMIEGG  240
TISITNVYSQ GLLNNLTQAL ESAGVDLSQA TISVQIDLGK RANGGLMSGI SIPKDPTNTP  300
LHQPIGHFRD ASNGEDPDQA QKRVKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-97bHLH family protein