PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122242.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 895aa MW: 103009 Da PI: 5.8668

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.7	1.2e-25	75	161	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfY++YA vGFsvrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dg +++t++e++HnHe XP_028122242.1 75 KFYCKYAGLVGFSVRKDWVNRSKVHGRVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGIYRITHFEENHNHE 161 6*****************************************999.999**********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MDRNDDDLVS SHDDDMDIRC QTSNNLDLNI EHDCCSPKVA HVGSVQSTLS SKDDSNSDGV 60 LKIGMEFESD EYAYKFYCKY AGLVGFSVRK DWVNRSKVHG RVVSRKFTCS KEGYRRKDKR 120 DVNVKKHRKE TRTGCLAHMI ITRQPDGIYR ITHFEENHNH ENVNPSNAQN LQELPSQGTI 180 DGAGVTEADS TINLERQSQL AFQLLGRQFG ARENLDYPAI DFENYLKSGR IRDLKEGEAG 240 RLLYYFQRQH FENPSFFYAI QLDVDDKISN IFWADDNMVV DYDHFGNVVC LDTTYRTQKD 300 FRPLVQFLGL NHHRQVVIFG AALMYDETID SLKWLFRTFI EAMSRKKPEA ILTDQDATII 360 QAIDSEIPET NHRVCIWQMY QNALKHLSHV TKDADSFAKV LRSCIFDHED EEDFIHAWDD 420 MVDKFTLRQN EWLRWMFREK ENWAVVYGKN SFFIDVKSTH LVENFSNNLK NYLNSDLDVL 480 QFFTHFESMV NKQRYNELEA NYDMGRCTPR LMANVVLLKH ASDLYTPKAF EVFQREYEKC 540 LNIVVNLFSE NGSLFEYKAN TYGQPREYTV TFNSSDGTVT CGCMKFEYVG ILCCHALKVL 600 DHRNIKVVPT CYILKRWTRD ARVESFRECA ISVEEESPKS ITASRYRKLC QSLLKISARA 660 AESNQAFEFA ARQLEGVMQG VEKILTLKPS EETQAITSSS TGAYASESEQ AEIFLDRNAI 720 EGQDDSNTFR GTNERETTAP DEDPLNNLVE KISKTKTSQN VHSLPPDTVA SISCPQPAYV 780 SSASSSLNPV TQGFYNFEAN QVVQCLYQPP NLSMAQQPNP DIYQPPNLFS NQHDSPSQAQ 840 LLQESLIRSP FQEPMSHRNQ LRQAMDLDVQ HPHSTSFVHY DHRYRASNGQ YFGSK

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MDRNDDDLVS SHDDDMDIRC QTSNNLDLNI EHDCCSPKVA HVGSVQSTLS SKDDSNSDGV  60
LKIGMEFESD EYAYKFYCKY AGLVGFSVRK DWVNRSKVHG RVVSRKFTCS KEGYRRKDKR  120
DVNVKKHRKE TRTGCLAHMI ITRQPDGIYR ITHFEENHNH ENVNPSNAQN LQELPSQGTI  180
DGAGVTEADS TINLERQSQL AFQLLGRQFG ARENLDYPAI DFENYLKSGR IRDLKEGEAG  240
RLLYYFQRQH FENPSFFYAI QLDVDDKISN IFWADDNMVV DYDHFGNVVC LDTTYRTQKD  300
FRPLVQFLGL NHHRQVVIFG AALMYDETID SLKWLFRTFI EAMSRKKPEA ILTDQDATII  360
QAIDSEIPET NHRVCIWQMY QNALKHLSHV TKDADSFAKV LRSCIFDHED EEDFIHAWDD  420
MVDKFTLRQN EWLRWMFREK ENWAVVYGKN SFFIDVKSTH LVENFSNNLK NYLNSDLDVL  480
QFFTHFESMV NKQRYNELEA NYDMGRCTPR LMANVVLLKH ASDLYTPKAF EVFQREYEKC  540
LNIVVNLFSE NGSLFEYKAN TYGQPREYTV TFNSSDGTVT CGCMKFEYVG ILCCHALKVL  600
DHRNIKVVPT CYILKRWTRD ARVESFRECA ISVEEESPKS ITASRYRKLC QSLLKISARA  660
AESNQAFEFA ARQLEGVMQG VEKILTLKPS EETQAITSSS TGAYASESEQ AEIFLDRNAI  720
EGQDDSNTFR GTNERETTAP DEDPLNNLVE KISKTKTSQN VHSLPPDTVA SISCPQPAYV  780
SSASSSLNPV TQGFYNFEAN QVVQCLYQPP NLSMAQQPNP DIYQPPNLFS NQHDSPSQAQ  840
LLQESLIRSP FQEPMSHRNQ LRQAMDLDVQ HPHSTSFVHY DHRYRASNGQ YFGSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-103	FAR1 family protein