PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122069.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 329aa    MW: 37015.9 Da    PI: 5.299
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.95e-36101022103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k+ye+++d++++++isw + +nsf+v+d+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+k+ll++
  XP_028122069.1  10 FIMKTYEMVSDPTTDRFISWGKANNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQKHLLKN 95 
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i r+k++
  XP_028122069.1  96 ISRRKHN 102
                     ****976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MEANNLIAPF IMKTYEMVSD PTTDRFISWG KANNSFIVVD PLDFSQRILP AYFKHNNFSS  60
FVRQLNTYGF RKVDPDRWEF ANEWFLRGQK HLLKNISRRK HNKQRKFEED DDEDEEIVME  120
IARLKQEQKD LETELEGMNK RLELTEKRPQ QMMAFLHRVV EDPEILPRMM LDKEKKRRLL  180
ISSSPSPSPS PSPSPSPSPS PSSSGVLATS CSVKSEGGEE IATIEAISSP NIDAFCRSPE  240
TPPSGWLSQR QVIGRPLLIT PESYNYNYAT ISTPLSPASA TGFTAVSPPM MMNGIFDKSG  300
GDLGYFGGME GGVEATPPPY PFSLFGNGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-86HSF family protein