PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122042.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 542aa MW: 63446.4 Da PI: 7.714

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.5	2.5e-24	35	124	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk k +++ ++r +vC+keg+r+ +k++ ++++raetrtgC+a+l +k+++ +gk++vt+++++ nH+l+ XP_028122042.1 35 DFYNTYGGRMGFSIRRDYCKKDKFTNQLIHRLLVCNKEGFRKVDKRD-PLSKNSRAETRTGCEARLYIKLHEgTGKYVVTDFKEKQNHDLV 124 6*****************************************999.9999****************9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MGFQLHFDID MEPENDCDWK PKLGMIFDSE QCAYDFYNTY GGRMGFSIRR DYCKKDKFTN 60 QLIHRLLVCN KEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHEGTGKY VVTDFKEKQN 120 HDLVSPECAH MLPSQRKIST TQAIQLDLAT QSGLRLGQSF ELMGREAGGR QCLGFTKLDS 180 KNYLRTKRQQ SLAYGEVGNV LQYFKEKSLQ NPSFFYAVQL DNEEQITNMF WADAQMIMDY 240 AQFGDVVTFD TTYKLNKEHR PFASFVGFNH HRETIIFGAA LLYDETTESF VWLFENFLEA 300 MSRKAPKTLF TDQDAAMAKA IPIVMPDTSH RLCTWHLMQN ALKHVNCLFQ DKGVKGVLNN 360 FFFHIEDANQ WKLEWAKMLD KYDAHENHWL KLTFAVKKKW EWPYARSTWA AGMSTTQLSE 420 SFNAFLKDYI RFDFNLNEFF MHFEKVLYEK RYKELEAGYT LCQRLLKVKV TIRMLIQIGN 480 VYTKKILEEF QNEYFQSIES DIEAIEYGEA STIYTVVDVG NKHARKVKME RDGSLGCNCT 540 KF

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MGFQLHFDID MEPENDCDWK PKLGMIFDSE QCAYDFYNTY GGRMGFSIRR DYCKKDKFTN  60
QLIHRLLVCN KEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHEGTGKY VVTDFKEKQN  120
HDLVSPECAH MLPSQRKIST TQAIQLDLAT QSGLRLGQSF ELMGREAGGR QCLGFTKLDS  180
KNYLRTKRQQ SLAYGEVGNV LQYFKEKSLQ NPSFFYAVQL DNEEQITNMF WADAQMIMDY  240
AQFGDVVTFD TTYKLNKEHR PFASFVGFNH HRETIIFGAA LLYDETTESF VWLFENFLEA  300
MSRKAPKTLF TDQDAAMAKA IPIVMPDTSH RLCTWHLMQN ALKHVNCLFQ DKGVKGVLNN  360
FFFHIEDANQ WKLEWAKMLD KYDAHENHWL KLTFAVKKKW EWPYARSTWA AGMSTTQLSE  420
SFNAFLKDYI RFDFNLNEFF MHFEKVLYEK RYKELEAGYT LCQRLLKVKV TIRMLIQIGN  480
VYTKKILEEF QNEYFQSIES DIEAIEYGEA STIYTVVDVG NKHARKVKME RDGSLGCNCT  540
KF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein