PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121796.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 547aa MW: 60193 Da PI: 6.4311

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2.1e-30	247	306	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_028121796.1 247 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHNHP 306 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MKARLNSSTS GSEVQEEKSD GSIHEEAKRG GTRGQFCEES TSKSSSPNLK SSGTRKEHDE 60 LESAKAEMTE VRQENARLKM MLEQIEKDYQ SLQTCFIDTI QHESKKKNDN LSLTHEDDIE 120 EPDLVSLRLG RSPSEPKRDS NTNTNTNTSS SSKTREDHEQ LNEDLKLGLD YNFQGSNSKS 180 DCVDHTSDQS KDNSLEEIVN KEEQAGETWP PSKVLKTMRS GDDELSQQSS LKRARVSVRA 240 RCDTPTMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP VRKQVQRCAD DMSILITTYE 300 GTHNHPLPIS ATAMASTTSA AASMLMSGSS TSQLQQPGLN FNLSDNSISR TRQFYLPNSS 360 SQPFPTITLD LTSTSTPSTH FNTFSSSFPS APRFSSTGLS FSSSESNILP TVWGNGYPNY 420 GTLPYNNKTN IGFYQPSYTD QKNNQQGPSD QQFLTETLTK AITSDPSFRS AIAAAISSIN 480 GKGETIQAVN SNPLNPNGKA CSSSYLNRSL NSQVGNLMLQ QQQQPPLPFS LSKNTSVSAA 540 DSRDQIN

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MKARLNSSTS GSEVQEEKSD GSIHEEAKRG GTRGQFCEES TSKSSSPNLK SSGTRKEHDE  60
LESAKAEMTE VRQENARLKM MLEQIEKDYQ SLQTCFIDTI QHESKKKNDN LSLTHEDDIE  120
EPDLVSLRLG RSPSEPKRDS NTNTNTNTSS SSKTREDHEQ LNEDLKLGLD YNFQGSNSKS  180
DCVDHTSDQS KDNSLEEIVN KEEQAGETWP PSKVLKTMRS GDDELSQQSS LKRARVSVRA  240
RCDTPTMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP VRKQVQRCAD DMSILITTYE  300
GTHNHPLPIS ATAMASTTSA AASMLMSGSS TSQLQQPGLN FNLSDNSISR TRQFYLPNSS  360
SQPFPTITLD LTSTSTPSTH FNTFSSSFPS APRFSSTGLS FSSSESNILP TVWGNGYPNY  420
GTLPYNNKTN IGFYQPSYTD QKNNQQGPSD QQFLTETLTK AITSDPSFRS AIAAAISSIN  480
GKGETIQAVN SNPLNPNGKA CSSSYLNRSL NSQVGNLMLQ QQQQPPLPFS LSKNTSVSAA  540
DSRDQIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-71	WRKY family protein