PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121760.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 689aa MW: 79457.6 Da PI: 8.0864

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.8	4.6e-10	65	110	2	47
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 fYn+YAk +GFsvr+s+++ s +n+ + +r++vC +eg +e++ + XP_028121760.1 65 FYNAYAKVIGFSVRRSRKRISGDNKFVESRKWVCPREGVSEKKYLQ 110 ***************************************9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MDEPESSRHE EVNIEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED 60 DAYTFYNAYA KVIGFSVRRS RKRISGDNKF VESRKWVCPR EGVSEKKYLQ RVERSGGYEK 120 VGFIHRDLHN QFQAERKVQL AEGDAEGALG YLSAKLDADP LFFFKYNVDK DNRLDKIFWA 180 DCRSRMDYAA FGDVLVFDTT YRTNAYKKPF VILAGVSNHF MTTIFGCALL PDETMETYTW 240 VLEMLMEAMD GKRPISVVTD GDRAMRQAIK RVIPNCRHRL CSWHLEKNAS TNVHIPEFTT 300 DFAQLMLKKC KIDEFDNAWA AMVKQYKLEN NNWVLDIHLK RDNWAEAYLR GRMFAGMRST 360 QRVEGINAYF NIFLNQKVRL YEFVAQYDRA LARMRVNEAE TESKTENSFP VLTTPLRSLE 420 KHAAELFTRK IFSLFQHEIR KEGKLFVMER VQLEDHRTYR FGEYKAPTCT WTVEYFPANI 480 TMKCCCLKFE SFGIPCCHMI AVMKSEQLMC IPPSCVLQRW TRRGRSKCQQ PSLTQICSTL 540 TQTARFGILS SCFSEMSYYA SHADKDFEEA REIAFQLTSQ MKKRWAMRKE GNAEAGDKNI 600 APKLYGVGDP NVVKTKGNPG GTSSMGKPPK PRRCGYCRSI GHTKRTCKKL ASSSHREGSN 660 SDSEPFMNTE LDPHTDDIDE LPICPNDPL

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MDEPESSRHE EVNIEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED  60
DAYTFYNAYA KVIGFSVRRS RKRISGDNKF VESRKWVCPR EGVSEKKYLQ RVERSGGYEK  120
VGFIHRDLHN QFQAERKVQL AEGDAEGALG YLSAKLDADP LFFFKYNVDK DNRLDKIFWA  180
DCRSRMDYAA FGDVLVFDTT YRTNAYKKPF VILAGVSNHF MTTIFGCALL PDETMETYTW  240
VLEMLMEAMD GKRPISVVTD GDRAMRQAIK RVIPNCRHRL CSWHLEKNAS TNVHIPEFTT  300
DFAQLMLKKC KIDEFDNAWA AMVKQYKLEN NNWVLDIHLK RDNWAEAYLR GRMFAGMRST  360
QRVEGINAYF NIFLNQKVRL YEFVAQYDRA LARMRVNEAE TESKTENSFP VLTTPLRSLE  420
KHAAELFTRK IFSLFQHEIR KEGKLFVMER VQLEDHRTYR FGEYKAPTCT WTVEYFPANI  480
TMKCCCLKFE SFGIPCCHMI AVMKSEQLMC IPPSCVLQRW TRRGRSKCQQ PSLTQICSTL  540
TQTARFGILS SCFSEMSYYA SHADKDFEEA REIAFQLTSQ MKKRWAMRKE GNAEAGDKNI  600
APKLYGVGDP NVVKTKGNPG GTSSMGKPPK PRRCGYCRSI GHTKRTCKKL ASSSHREGSN  660
SDSEPFMNTE LDPHTDDIDE LPICPNDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-83	FAR1 family protein