PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028121573.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 747aa    MW: 82249.8 Da    PI: 6.5771
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028121573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.63.5e-1193607392374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfs 94 
                      +lLl+cA+av+++++e+a+++L ++se+++p g++ qR+aayf eA++arl++s  ++y++l p+++++++  +++ ++a+++f+ +sP++kfs
  XP_028121573.1 360 LTLLLKCADAVAADNFEEANKMLLEISEMSTPVGTSAQRVAAYFSEAMSARLVNSYLGIYETLVPRNQTQTQtqTQQMVSAFQVFNGISPLVKFS 454
                     579************************************************************87777666556899999*************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+taNqaI ea+e+e+rvHiiD+di+qG+QWp L++ LasRp+gpp +R+Tg+g     s ++le+tg+rL++fA++lg+pfef++ va+++ +l
  XP_028121573.1 455 HFTANQAIQEALEREDRVHIIDLDIMQGMQWPGLFHVLASRPGGPPFVRLTGLGT----SMDSLEATGKRLSDFAHKLGLPFEFSP-VADKVGNL 544
                     *******************************************************....***************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++e+L+v++++a+a+++    h+l+d ++s ++     L+l+++l Pkvv+vveq++ h ++sFlerf+ea++yysa+fdsl a++++es+er++
  XP_028121573.1 545 DPERLNVSKRDAVAIHWLQ--HSLYDVTGSDTN----ALWLFQRLAPKVVTVVEQDLRH-AGSFLERFVEAIHYYSAMFDSLGASYGEESKERHV 632
                     ******************9..999999999999....**********************.899******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhe....tlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg............yrveeesgslvlgW 362
                     vE++ll+rei+n++a  g  r   +     +   Wre+l+++GFk ++l  +a++qa lll +++ +d             y++ ee+g+l lgW
  XP_028121573.1 633 VEQQLLSREIRNILAVGGLPRSRINSvddcSCYYWREKLQQCGFKGISLAGNATAQATLLLGMFPkNDNnssasndgigggYTLVEENGTLKLGW 727
                     *****************98865443311224668*****************************995442333333334445777799******** PP

            GRAS 363 kdrpLvsvSaWr 374
                     kd  L+++SaWr
  XP_028121573.1 728 KDLCLLTASAWR 739
                     ***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
MLPSSANHPS VTLSSGGSGF STTTGLTYYT YLELEPPHSP PHRQRQSQSQ TTPSICVFSG  60
LPLFPPENET EKAQNTNSPL DVQQQLSAAA VVVAPFSIAA TTSSPLPPPP PIISTSATSA  120
SMEMEYTMAT AWIDDIIKNL IHSTTNHHHH HHHNHHVSIP HLIQNVREII HPCNPNLAAL  180
LEYRLWSLSD LPLTDPIPIL PDYSEGESIK EAAAEKNAAG KVHIHHHHHQ NQQGQVQQGS  240
SGFKLYLGSG CGLDNLSYHL PDTVTSHAMN QYLNLGITLP ATMTSPNTIF SSGNVQQTQH  300
LCCNQMTSPC SIAPPPPVIS SSSSQVEQST AIVTTTRLKK KEEIRRQQQH KRDEEGLHLL  360
TLLLKCADAV AADNFEEANK MLLEISEMST PVGTSAQRVA AYFSEAMSAR LVNSYLGIYE  420
TLVPRNQTQT QTQTQQMVSA FQVFNGISPL VKFSHFTANQ AIQEALERED RVHIIDLDIM  480
QGMQWPGLFH VLASRPGGPP FVRLTGLGTS MDSLEATGKR LSDFAHKLGL PFEFSPVADK  540
VGNLDPERLN VSKRDAVAIH WLQHSLYDVT GSDTNALWLF QRLAPKVVTV VEQDLRHAGS  600
FLERFVEAIH YYSAMFDSLG ASYGEESKER HVVEQQLLSR EIRNILAVGG LPRSRINSVD  660
DCSCYYWREK LQQCGFKGIS LAGNATAQAT LLLGMFPKND NNSSASNDGI GGGYTLVEEN  720
GTLKLGWKDL CLLTASAWRW RTTMPFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein