PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028121527.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HB-other | ||||||||
Protein Properties | Length: 122aa MW: 13832.3 Da PI: 10.4284 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.3 | 1.7e-15 | 45 | 92 | 7 | 54 |
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 f + ++ L + F++n+yp+++++e+LA++l++t +qV+ WF N R k XP_028121527.1 45 FGEAVTQGLAKSFNENHYPDRAMKEKLATELEITVKQVSKWFANARWK 92 67788999**************************************88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MQHSQGESEH TPKKRAHEEL DVEGTNNSPA KFYERGSNGT STKRFGEAVT QGLAKSFNEN 60 HYPDRAMKEK LATELEITVK QVSKWFANAR WKFHHPLPAR QRSTTSGVRK RKSTPDDHQG 120 SG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 6e-13 | HB-PHD family protein |