PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028121477.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 765aa    MW: 86598 Da    PI: 4.8808
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028121477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS343.63.4e-1053867621373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+ v+ +d + a++ L++++++asp g+  qR+a+ f+++L+arla+++s++y++l++++ +    +e+l+a++l+  + P+  +s 
  XP_028121477.1 386 LRTLLINCAQSVAIDDRRTAKEQLKQIRQHASPFGNGSQRVAHIFANGLEARLAGTGSQIYATLASKRIT---AAERLKAYQLYLSAAPFRMIST 477
                     6789************************************************************999998...9********************* PP

            GRAS  96 ltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                     +  N++Il+ + ++  +++HiiDf+i +G+QWp L+q L++ p+g+ +lRiTg++ p++g   +e +eetg+rLak++e+++v+f+++  +a+++
  XP_028121477.1 478 FFSNKMILDLAMNStkKKLHIIDFGILYGFQWPILIQYLSALPGGALELRITGIELPQPGfrPAELVEETGRRLAKYCERFNVRFQYHG-IAQKW 571
                     *********9888767999****************************************9*999*************************.7**** PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.. 279
                     e++++e+L+++++E+laVn+ ++   l+de+v+++s+rd+vLkl+++++P++++++  + +hn++ F++rf eal yys++fd+++ +++re   
  XP_028121477.1 572 ETIKIEDLNIQSDEVLAVNSLFRFRILPDETVDVDSPRDAVLKLIRKMNPDIFTHSVLNGSHNAPFFVTRFREALFYYSSIFDMFDITMSREGqe 666
                     ****************************************************************************************9998878 PP

            GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                      +er+++Ere+ gre++n++acegaer+er et+++W+   ++aGFk +pl+++  k+ +  l++ +    + +ee+ +++++gWk+r   + S+
  XP_028121477.1 667 gQERVNLEREFYGREVMNIIACEGAERVERPETYKHWQVHNMRAGFKMLPLNQELLKKFRGKLKTGGyHTDFVIEEDGQWMLQGWKGRIFCASSC 761
                     89**********************************************************99999888888************************ PP

            GRAS 373 W 373
                     W
  XP_028121477.1 762 W 762
                     * PP
Sequence ? help Back to Top
Protein Sequence    Length: 765 aa     Download sequence    
MDPRFTEFSD STDSFNFDDD SFLQPENLAN MFKFKDDLPL LDFDSVDPSF LPPDSPEPGF  60
FAQTSSRNSE VDSQDDSDFS GNVLNYINSI IMEENIEQKP SMFHDPLALQ ETEKSLYDVL  120
GEKYPASPNQ PSPLYFNPNV ESPDFLFGGS SEQSAGTNTN GTNSIDSQWI VDPGEQKQSV  180
LSSPSGYPFE TTLKPTSQLS FDSTRGFSDD SNGLMDSSMS SHLVSNMFSN SESILQFKRG  240
MEEASKFLPK NNQLIIDLDS YKLPPQSEER ASEVVVKVEE GRDSLPNGSR GRKNHHREDI  300
DLEEERSSKQ SAVYMDESEL SEMFDRVLLF TGMKVDPVCH NGCNGEEEVQ QTEATKTSQQ  360
NGQPHGSSGA KTRAKKQGNK NEVVDLRTLL INCAQSVAID DRRTAKEQLK QIRQHASPFG  420
NGSQRVAHIF ANGLEARLAG TGSQIYATLA SKRITAAERL KAYQLYLSAA PFRMISTFFS  480
NKMILDLAMN STKKKLHIID FGILYGFQWP ILIQYLSALP GGALELRITG IELPQPGFRP  540
AELVEETGRR LAKYCERFNV RFQYHGIAQK WETIKIEDLN IQSDEVLAVN SLFRFRILPD  600
ETVDVDSPRD AVLKLIRKMN PDIFTHSVLN GSHNAPFFVT RFREALFYYS SIFDMFDITM  660
SREGQEGQER VNLEREFYGR EVMNIIACEG AERVERPETY KHWQVHNMRA GFKMLPLNQE  720
LLKKFRGKLK TGGYHTDFVI EEDGQWMLQG WKGRIFCASS CWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein