PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028121476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 765aa MW: 86598 Da PI: 4.8808 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 343.6 | 3.4e-105 | 386 | 762 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA+ v+ +d + a++ L++++++asp g+ qR+a+ f+++L+arla+++s++y++l++++ + +e+l+a++l+ + P+ +s XP_028121476.1 386 LRTLLINCAQSVAIDDRRTAKEQLKQIRQHASPFGNGSQRVAHIFANGLEARLAGTGSQIYATLASKRIT---AAERLKAYQLYLSAAPFRMIST 477 6789************************************************************999998...9********************* PP GRAS 96 ltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186 + N++Il+ + ++ +++HiiDf+i +G+QWp L+q L++ p+g+ +lRiTg++ p++g +e +eetg+rLak++e+++v+f+++ +a+++ XP_028121476.1 478 FFSNKMILDLAMNStkKKLHIIDFGILYGFQWPILIQYLSALPGGALELRITGIELPQPGfrPAELVEETGRRLAKYCERFNVRFQYHG-IAQKW 571 *********9888767999****************************************9*999*************************.7**** PP GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.. 279 e++++e+L+++++E+laVn+ ++ l+de+v+++s+rd+vLkl+++++P++++++ + +hn++ F++rf eal yys++fd+++ +++re XP_028121476.1 572 ETIKIEDLNIQSDEVLAVNSLFRFRILPDETVDVDSPRDAVLKLIRKMNPDIFTHSVLNGSHNAPFFVTRFREALFYYSSIFDMFDITMSREGqe 666 ****************************************************************************************9998878 PP GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372 +er+++Ere+ gre++n++acegaer+er et+++W+ ++aGFk +pl+++ k+ + l++ + + +ee+ +++++gWk+r + S+ XP_028121476.1 667 gQERVNLEREFYGREVMNIIACEGAERVERPETYKHWQVHNMRAGFKMLPLNQELLKKFRGKLKTGGyHTDFVIEEDGQWMLQGWKGRIFCASSC 761 89**********************************************************99999888888************************ PP GRAS 373 W 373 W XP_028121476.1 762 W 762 * PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 765 aa Download sequence |
MDPRFTEFSD STDSFNFDDD SFLQPENLAN MFKFKDDLPL LDFDSVDPSF LPPDSPEPGF 60 FAQTSSRNSE VDSQDDSDFS GNVLNYINSI IMEENIEQKP SMFHDPLALQ ETEKSLYDVL 120 GEKYPASPNQ PSPLYFNPNV ESPDFLFGGS SEQSAGTNTN GTNSIDSQWI VDPGEQKQSV 180 LSSPSGYPFE TTLKPTSQLS FDSTRGFSDD SNGLMDSSMS SHLVSNMFSN SESILQFKRG 240 MEEASKFLPK NNQLIIDLDS YKLPPQSEER ASEVVVKVEE GRDSLPNGSR GRKNHHREDI 300 DLEEERSSKQ SAVYMDESEL SEMFDRVLLF TGMKVDPVCH NGCNGEEEVQ QTEATKTSQQ 360 NGQPHGSSGA KTRAKKQGNK NEVVDLRTLL INCAQSVAID DRRTAKEQLK QIRQHASPFG 420 NGSQRVAHIF ANGLEARLAG TGSQIYATLA SKRITAAERL KAYQLYLSAA PFRMISTFFS 480 NKMILDLAMN STKKKLHIID FGILYGFQWP ILIQYLSALP GGALELRITG IELPQPGFRP 540 AELVEETGRR LAKYCERFNV RFQYHGIAQK WETIKIEDLN IQSDEVLAVN SLFRFRILPD 600 ETVDVDSPRD AVLKLIRKMN PDIFTHSVLN GSHNAPFFVT RFREALFYYS SIFDMFDITM 660 SREGQEGQER VNLEREFYGR EVMNIIACEG AERVERPETY KHWQVHNMRA GFKMLPLNQE 720 LLKKFRGKLK TGGYHTDFVI EEDGQWMLQG WKGRIFCASS CWVPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | GRAS family protein |