PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121470.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 764aa MW: 88254.1 Da PI: 7.031

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33.6	1.3e-10	70	143	1	77
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwe 77 ++Y++Y+k+ GF v+k++ k++ ++ge t C++ gk++ ++++ + r++t+tgCka l+ +++ + + + XP_028121470.1 70 EYYSRYGKRNGFAVSKKYCKRR-DDGEKRYVTIACTRAGKAKIRTSN---IVKLRPQTKTGCKAGLNANLQGiRMNKN 143 69*************98886.9999************9988...999***********999886555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
MEVTWAATTS NKDASLAFLA GMDKEISSGS NEDCDEIDIE TEIEDTKNVE VEIEDPKVGM 60 TFKSIDEIYE YYSRYGKRNG FAVSKKYCKR RDDGEKRYVT IACTRAGKAK IRTSNIVKLR 120 PQTKTGCKAG LNANLQGIRM NKNFTSLVLE AGGHEKLSYL EKDCRNHMDK VRRLKLEKGD 180 ATAMYDYFVN MQADNSEFFY VLDLDEDGKL LNVFWADARS RAAFKEFGDV VTFDTTYLVN 240 KYDMPFAPFI GVNHHGQSTL LGCGLISHEN IETFTWLFKS WLACISGCPP NAIITDQDKA 300 MKKAIQIVFP NVRHRWCLWH ILKKLPEKLR GYKEYKAIKF GIQNAVYNSL TKKEFEENWN 360 KLIENYQLEG NEWLFGLFED RHQWVPAFVK DIFWAGMSTT QRSESMHAFF DRYINSKTTL 420 KQFVEQYENA LAKKVENENG EEFNSLNSYI PCIAQYPFEK QFQKAYTIAK FKEFQQEVAG 480 QLHCNLSLYT QGPDFSVYEV SEDVPFGENL RLGTFIVYFD KENFDTNCSC RLFEFRGIVC 540 RHQIVVLMKE RVHEISDKYI LRRWNKNVKR CHSKVIINYN NSSMLPETRR YNKMFNVFND 600 VADLATDCEN RCDMVVEQLL ELKGKLKEEV EIDYGNNKSS FVSNHHNSTT HGDGVSKSKE 660 SRIILDPVAL RQKGRPPCKR KQSMVEKQSE FGASSNIGLV DLGTQESIQV NESEILGPSL 720 QQQNIFQENL SYQLRNTLGH HHPSPSLIFE HSSFTKMLND IVQS

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

MEVTWAATTS NKDASLAFLA GMDKEISSGS NEDCDEIDIE TEIEDTKNVE VEIEDPKVGM  60
TFKSIDEIYE YYSRYGKRNG FAVSKKYCKR RDDGEKRYVT IACTRAGKAK IRTSNIVKLR  120
PQTKTGCKAG LNANLQGIRM NKNFTSLVLE AGGHEKLSYL EKDCRNHMDK VRRLKLEKGD  180
ATAMYDYFVN MQADNSEFFY VLDLDEDGKL LNVFWADARS RAAFKEFGDV VTFDTTYLVN  240
KYDMPFAPFI GVNHHGQSTL LGCGLISHEN IETFTWLFKS WLACISGCPP NAIITDQDKA  300
MKKAIQIVFP NVRHRWCLWH ILKKLPEKLR GYKEYKAIKF GIQNAVYNSL TKKEFEENWN  360
KLIENYQLEG NEWLFGLFED RHQWVPAFVK DIFWAGMSTT QRSESMHAFF DRYINSKTTL  420
KQFVEQYENA LAKKVENENG EEFNSLNSYI PCIAQYPFEK QFQKAYTIAK FKEFQQEVAG  480
QLHCNLSLYT QGPDFSVYEV SEDVPFGENL RLGTFIVYFD KENFDTNCSC RLFEFRGIVC  540
RHQIVVLMKE RVHEISDKYI LRRWNKNVKR CHSKVIINYN NSSMLPETRR YNKMFNVFND  600
VADLATDCEN RCDMVVEQLL ELKGKLKEEV EIDYGNNKSS FVSNHHNSTT HGDGVSKSKE  660
SRIILDPVAL RQKGRPPCKR KQSMVEKQSE FGASSNIGLV DLGTQESIQV NESEILGPSL  720
QQQNIFQENL SYQLRNTLGH HHPSPSLIFE HSSFTKMLND IVQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-113	FAR1 family protein