PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121396.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 1834aa MW: 206339 Da PI: 5.0072

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.2	5.7e-18	25	79	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ ++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_028121396.1 25 KRKMKTASQLEILEKTYAAETYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 79 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1834 aa Download sequence
MEGGGGGGSD GEKKKPPESG ENKVKRKMKT ASQLEILEKT YAAETYPSEA LRAELSVKLG 60 LSDRQLQMWF CHRRLKDRKT PPVKRPRKDA SPAAVVASSS GVGDEMVVGE VGNEHVSGSG 120 SGSSPFRHVE THQQPHPQHH QRVVPRTGAA IPRIAADMPA MKRYYEPPQA ISELRAIAFV 180 EAQLGEPLRE DGPILGMEFD PLPPGAFGAP IVTVGQQKPA TRLYEPNLYE RPDAKPIKGA 240 ARALHEYQFL PEQPSVRNDT YERAASSHYF SSPTDVPSGR SALPTGRSFM HGNEQVPSGY 300 GFQGQMPNLS LLPHQGRQGH PLPSTSGEYD IVPRKNSVAN IGTDAHFGAH PITGLENPFI 360 PSDRRVTTHE EDISRIERKR KLYLQSEEAR IAKEVEAHEK RIRKELEKQD ILRRKREEQM 420 RKEMERQDRE RRKEEERLLR EKQREEERYQ REQKREMERR EKFLQKESIR AEKMRLKEEL 480 RREKEAARQK AANDRATARR IAKESMELIE DERLELMELA ASSRGLPSIL SLDSETLQNL 540 ELYRDKLVEF PPKSVHLRRP FSIQPWTDSE ENIGNLLMVW RFLINFADVL GLWPFTLDEF 600 VQAFHDYDPR LLGEIHLALL RSIIKDIEDV ARTPSSTGLG VNQNTAANPG GGHPQIVEGA 660 YAWGFDIRSW QRHLNPLTWP EILRQFALSA GFGPKLKKRS IEQAYLRDEN EGNDGEDIIS 720 NLRNGAAAEN ALAIMQERGF SNPRRSRHRL TPGTVKFAAF HVLSLEGSNG LTILEVAEKI 780 QKSGLRDLTT SKTPEASIAA ALSRDSKLFE RTAPSTYCVR TPYRKDPVDT EAILSAAREK 840 IQIFKNGYLD GEDAEDVEPD DVERDEDSES DIAEDPEADD LGTELKPNNE ALSCEANRYL 900 AKTLPADGKD TYCDEVMETP EVGVKNLGDS SPLMQSEGYK EVKSIGASVD QSIDVAGICN 960 EAATLDQEDT VIDESNSGEP WVQGLMEGEY SDLSVEERLS ALVALIGIAN EGNSIRIILE 1020 ERLEAANALK KQMWAEVQLD KRRMKEEYVM KMQYPSHISD KTEPNVQISS VEGRQSPLPT 1080 VDDKNGLVST NPVEQKEHLH DAQNDQNYTI HMPTERNPPI QEASTCTDNL SLLQPGYAAE 1140 RSRSQLKAYI GHKAEEMYVY RSLPLGQDRR RNRYWQFITS SSRNDPGSGR IFVELRHGCW 1200 RLIDSEEGFD ALLASLDVRG LRESNLHSML QKVEVSFKET LRRNLAHTKA GRPINNFKTE 1260 VSGMAYSLDC SASSDSPSCT VYVSNSDMPE PSSSFSIGLG RNETEKKDAL KRYQDFEKWM 1320 WEECLNSSVL YAVKYGKKRC RQLLDVCDCR DVYYFEDDHC PSCHRTYETS IRDINFSEHV 1380 AKCKEKFKGD PCWTSQGLDP SPPLRIRLHK ALLALIEVSI PIEALQPAWS EGYRRSWGMK 1440 LHTVTSAEEL LQILTLLEVG IKKDFLSSNF ETTNELLGSC NQTEFAANVS LNSELVSVLP 1500 WVPQTSSAVA LRLMELDASI YYELHQKKID SQKDKGAGDF IMPPSKFSLV KNVPEYDLAQ 1560 APLETENLLQ EPWADHGSLH SSSGRGRGAR GRGRGGRTRG GRSQRRAISS RSVNAQRSTT 1620 TNSERFGQLL GWKGRSRGRG GRKRGRRTAR SRQKPVKRVA EIGSERDQPK EVLFENTVRS 1680 SDLQWNREEP TGTPLLGAEN ASSSERSEYE DYNRQAMAED EYDDDLMVDD YSSVFNGKSM 1740 HLMEGIDYNL DGEEDDDDRA QEEGDDDADA DGDGDEDEGD DSEEDGQGDT DVERYINDES 1800 DEGEEENRDG GGEQIGNTDE GEGTGSTSSE YSDE

Sequence ? help Back to Top

Protein Sequence Length: 1834 aa Download sequence

MEGGGGGGSD GEKKKPPESG ENKVKRKMKT ASQLEILEKT YAAETYPSEA LRAELSVKLG  60
LSDRQLQMWF CHRRLKDRKT PPVKRPRKDA SPAAVVASSS GVGDEMVVGE VGNEHVSGSG  120
SGSSPFRHVE THQQPHPQHH QRVVPRTGAA IPRIAADMPA MKRYYEPPQA ISELRAIAFV  180
EAQLGEPLRE DGPILGMEFD PLPPGAFGAP IVTVGQQKPA TRLYEPNLYE RPDAKPIKGA  240
ARALHEYQFL PEQPSVRNDT YERAASSHYF SSPTDVPSGR SALPTGRSFM HGNEQVPSGY  300
GFQGQMPNLS LLPHQGRQGH PLPSTSGEYD IVPRKNSVAN IGTDAHFGAH PITGLENPFI  360
PSDRRVTTHE EDISRIERKR KLYLQSEEAR IAKEVEAHEK RIRKELEKQD ILRRKREEQM  420
RKEMERQDRE RRKEEERLLR EKQREEERYQ REQKREMERR EKFLQKESIR AEKMRLKEEL  480
RREKEAARQK AANDRATARR IAKESMELIE DERLELMELA ASSRGLPSIL SLDSETLQNL  540
ELYRDKLVEF PPKSVHLRRP FSIQPWTDSE ENIGNLLMVW RFLINFADVL GLWPFTLDEF  600
VQAFHDYDPR LLGEIHLALL RSIIKDIEDV ARTPSSTGLG VNQNTAANPG GGHPQIVEGA  660
YAWGFDIRSW QRHLNPLTWP EILRQFALSA GFGPKLKKRS IEQAYLRDEN EGNDGEDIIS  720
NLRNGAAAEN ALAIMQERGF SNPRRSRHRL TPGTVKFAAF HVLSLEGSNG LTILEVAEKI  780
QKSGLRDLTT SKTPEASIAA ALSRDSKLFE RTAPSTYCVR TPYRKDPVDT EAILSAAREK  840
IQIFKNGYLD GEDAEDVEPD DVERDEDSES DIAEDPEADD LGTELKPNNE ALSCEANRYL  900
AKTLPADGKD TYCDEVMETP EVGVKNLGDS SPLMQSEGYK EVKSIGASVD QSIDVAGICN  960
EAATLDQEDT VIDESNSGEP WVQGLMEGEY SDLSVEERLS ALVALIGIAN EGNSIRIILE  1020
ERLEAANALK KQMWAEVQLD KRRMKEEYVM KMQYPSHISD KTEPNVQISS VEGRQSPLPT  1080
VDDKNGLVST NPVEQKEHLH DAQNDQNYTI HMPTERNPPI QEASTCTDNL SLLQPGYAAE  1140
RSRSQLKAYI GHKAEEMYVY RSLPLGQDRR RNRYWQFITS SSRNDPGSGR IFVELRHGCW  1200
RLIDSEEGFD ALLASLDVRG LRESNLHSML QKVEVSFKET LRRNLAHTKA GRPINNFKTE  1260
VSGMAYSLDC SASSDSPSCT VYVSNSDMPE PSSSFSIGLG RNETEKKDAL KRYQDFEKWM  1320
WEECLNSSVL YAVKYGKKRC RQLLDVCDCR DVYYFEDDHC PSCHRTYETS IRDINFSEHV  1380
AKCKEKFKGD PCWTSQGLDP SPPLRIRLHK ALLALIEVSI PIEALQPAWS EGYRRSWGMK  1440
LHTVTSAEEL LQILTLLEVG IKKDFLSSNF ETTNELLGSC NQTEFAANVS LNSELVSVLP  1500
WVPQTSSAVA LRLMELDASI YYELHQKKID SQKDKGAGDF IMPPSKFSLV KNVPEYDLAQ  1560
APLETENLLQ EPWADHGSLH SSSGRGRGAR GRGRGGRTRG GRSQRRAISS RSVNAQRSTT  1620
TNSERFGQLL GWKGRSRGRG GRKRGRRTAR SRQKPVKRVA EIGSERDQPK EVLFENTVRS  1680
SDLQWNREEP TGTPLLGAEN ASSSERSEYE DYNRQAMAED EYDDDLMVDD YSSVFNGKSM  1740
HLMEGIDYNL DGEEDDDDRA QEEGDDDADA DGDGDEDEGD DSEEDGQGDT DVERYINDES  1800
DEGEEENRDG GGEQIGNTDE GEGTGSTSSE YSDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	27	KKPPESGENKVKRK
2	1585	1595	RGRGARGRGRG
3	1587	1597	RGRGARGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein