PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121123.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 408aa MW: 46491.9 Da PI: 5.7213

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.5	1.7e-21	93	187	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 +fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a r+gCka+++++ + gk++vt+++ +HnHel XP_028121123.1 93 DFYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKNRAPKALIRVGCKAQFRIRYDAdageGGKYVVTHFVADHNHEL 186 6***************9999.666699999*****99988877889999************987677789************9 PP FAR1 90 a 90 a XP_028121123.1 187 A 187 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MSMAPAEVKR EGDDYDIPNE ADDIRLMNES RAEPDHGCEA GPSNEEATNM NVEDGGADVK 60 KEMVDDAHHN DMVGDLERAI LEQKFDSVKD GEDFYNAYAK AKGFSIRKSR FNTNKEGKVV 120 SRLWLCSREG QRLPKYLDRV AEKNRAPKAL IRVGCKAQFR IRYDADAGEG GKYVVTHFVA 180 DHNHELAEQH CVVYLRSHHS LNSTDKAQAM AMRNVGVKTS QIMDYMVNQS WSYENVGFIR 240 TDLHNHIQAE RRAEVEDGDA QGVLVYLCAK LDVDARLFYK YDVCNDNKLQ NLFWADSKSR 300 ADYAKFANET IETYTWVLET FMEAMGNKAP VSVLTDGDKS MREAIRRVFP DARHRLCNWH 360 LGKNAVSNVH ISGFAHAFKQ CMDMETDETK FEHGWTTMVE EFGLQTNS

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MSMAPAEVKR EGDDYDIPNE ADDIRLMNES RAEPDHGCEA GPSNEEATNM NVEDGGADVK  60
KEMVDDAHHN DMVGDLERAI LEQKFDSVKD GEDFYNAYAK AKGFSIRKSR FNTNKEGKVV  120
SRLWLCSREG QRLPKYLDRV AEKNRAPKAL IRVGCKAQFR IRYDADAGEG GKYVVTHFVA  180
DHNHELAEQH CVVYLRSHHS LNSTDKAQAM AMRNVGVKTS QIMDYMVNQS WSYENVGFIR  240
TDLHNHIQAE RRAEVEDGDA QGVLVYLCAK LDVDARLFYK YDVCNDNKLQ NLFWADSKSR  300
ADYAKFANET IETYTWVLET FMEAMGNKAP VSVLTDGDKS MREAIRRVFP DARHRLCNWH  360
LGKNAVSNVH ISGFAHAFKQ CMDMETDETK FEHGWTTMVE EFGLQTNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-45	FAR1 family protein