PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121086.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 344aa MW: 38380.5 Da PI: 7.3113

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.1	7.6e-24	79	123	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs++++ ++k+CErH++rgr+rsrk++e+ XP_028121086.1 79 DPEPGRCRRTDGKKWRCSKDAYVDSKYCERHMNRGRNRSRKPVES 123 79****************************************986 PP
2	QLQ	65	1.8e-22	19	54	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ+q+L++Q+l+yKyL+a++PvPp+Ll +i++ XP_028121086.1 19 PFTAAQWQELEHQALIYKYLLAGLPVPPDLLIPIRR 54 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSGASSSVAA AAGVGIRPPF TAAQWQELEH QALIYKYLLA GLPVPPDLLI PIRRSLESIS 60 ARFLHHSSCY CSYYGKKIDP EPGRCRRTDG KKWRCSKDAY VDSKYCERHM NRGRNRSRKP 120 VESQSTSQSL STVVSHSATG SSSGCGSFQN LPLHSIVNNE SSLLASNTST LQREPVSYGI 180 NDKEYRYTHE VNPEVDQLNF HPEGSRSVQV LGIDRNVDNT WHPMPSCVQV DPSPNPSYGA 240 YLQSNSCQPH MLQDFESMSN AAMSRQRQQY CFFGSEFGSP GPVKQESHAV RPFLDDWPKA 300 RDSWTDPDDQ RYDKSTFSTT QLSISVPIPL SEISDRSPHS PNDA

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSGASSSVAA AAGVGIRPPF TAAQWQELEH QALIYKYLLA GLPVPPDLLI PIRRSLESIS  60
ARFLHHSSCY CSYYGKKIDP EPGRCRRTDG KKWRCSKDAY VDSKYCERHM NRGRNRSRKP  120
VESQSTSQSL STVVSHSATG SSSGCGSFQN LPLHSIVNNE SSLLASNTST LQREPVSYGI  180
NDKEYRYTHE VNPEVDQLNF HPEGSRSVQV LGIDRNVDNT WHPMPSCVQV DPSPNPSYGA  240
YLQSNSCQPH MLQDFESMSN AAMSRQRQQY CFFGSEFGSP GPVKQESHAV RPFLDDWPKA  300
RDSWTDPDDQ RYDKSTFSTT QLSISVPIPL SEISDRSPHS PNDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-47	GRF family protein