PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028121085.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRF | ||||||||
Protein Properties | Length: 345aa MW: 38447.6 Da PI: 7.3249 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 75.1 | 7.7e-24 | 80 | 124 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs++++ ++k+CErH++rgr+rsrk++e+ XP_028121085.1 80 DPEPGRCRRTDGKKWRCSKDAYVDSKYCERHMNRGRNRSRKPVES 124 79****************************************986 PP | |||||||
2 | QLQ | 65 | 1.8e-22 | 19 | 54 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ+q+L++Q+l+yKyL+a++PvPp+Ll +i++ XP_028121085.1 19 PFTAAQWQELEHQALIYKYLLAGLPVPPDLLIPIRR 54 9*********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MSGASSSVAA AAGVGIRPPF TAAQWQELEH QALIYKYLLA GLPVPPDLLI PIRRSLESIS 60 ARFLHHSSLG YCSYYGKKID PEPGRCRRTD GKKWRCSKDA YVDSKYCERH MNRGRNRSRK 120 PVESQSTSQS LSTVVSHSAT GSSSGCGSFQ NLPLHSIVNN ESSLLASNTS TLQREPVSYG 180 INDKEYRYTH EVNPEVDQLN FHPEGSRSVQ VLGIDRNVDN TWHPMPSCVQ VDPSPNPSYG 240 AYLQSNSCQP HMLQDFESMS NAAMSRQRQQ YCFFGSEFGS PGPVKQESHA VRPFLDDWPK 300 ARDSWTDPDD QRYDKSTFST TQLSISVPIP LSEISDRSPH SPNDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 2e-48 | GRF family protein |