PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028120992.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 608aa MW: 66369.6 Da PI: 7.695

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028120992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.9	5.8e-30	260	318	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+aed++++++tYeg+Hnh+ XP_028120992.1 260 VDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCAEDTSILTTTYEGTHNHP 318 59***********************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MEVVSLRKSC KGGGIKEEKR VESSGNEESF KEEIVLKFGN GRDDHEDHNL KPLSPNRNDN 60 QMSVMPTMDR SSAEPNSRAS SSVQKDQLES AKAEMGEVRE ENKRLRMNLN RIIKEYQTLQ 120 MQFYDIARQE SKEFTNTARE ETEDPDQLVS LSLGRTSRDS KKDIEKPRKG KEDIQQDDKE 180 GLALGLHCDF DMSKTRPIET PVKPSPENSL EMKEEEAGEG WAPNKVLKTT RSEDDEVSQQ 240 NPAKKARVSV RVRCDTPTMV DGCQWRKYGQ KIAKGNPCPR AYYRCTVSPS CPVRKQVQRC 300 AEDTSILTTT YEGTHNHPLP ISATAMASTT SAAASMLLSG SSTSSGGTIT SATAADFRGL 360 NFYLSDHSKS KQFYLPNCSM SSSPSYPTIT LDLTTPTPSS SSSSSHFNIT SSSNFLSTPR 420 YSSTNLNFSS FESNPIPVGV LNYGSQTYNK NQVNSLSFAR QPQENFYHTF MQKGNPNPNP 480 NPPQQPLQTD AIAAATKAIT SDPSFQSALA AALTSIIGSG GSGGGGNPGY QIESNKVGQN 540 SKFGEPFPLV SSFPSATPNG IKCSSSYFNR PPSSANSQPG SLMFLQPALP PLSTSEGKST 600 SPSRDHVL

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MEVVSLRKSC KGGGIKEEKR VESSGNEESF KEEIVLKFGN GRDDHEDHNL KPLSPNRNDN  60
QMSVMPTMDR SSAEPNSRAS SSVQKDQLES AKAEMGEVRE ENKRLRMNLN RIIKEYQTLQ  120
MQFYDIARQE SKEFTNTARE ETEDPDQLVS LSLGRTSRDS KKDIEKPRKG KEDIQQDDKE  180
GLALGLHCDF DMSKTRPIET PVKPSPENSL EMKEEEAGEG WAPNKVLKTT RSEDDEVSQQ  240
NPAKKARVSV RVRCDTPTMV DGCQWRKYGQ KIAKGNPCPR AYYRCTVSPS CPVRKQVQRC  300
AEDTSILTTT YEGTHNHPLP ISATAMASTT SAAASMLLSG SSTSSGGTIT SATAADFRGL  360
NFYLSDHSKS KQFYLPNCSM SSSPSYPTIT LDLTTPTPSS SSSSSHFNIT SSSNFLSTPR  420
YSSTNLNFSS FESNPIPVGV LNYGSQTYNK NQVNSLSFAR QPQENFYHTF MQKGNPNPNP  480
NPPQQPLQTD AIAAATKAIT SDPSFQSALA AALTSIIGSG GSGGGGNPGY QIESNKVGQN  540
SKFGEPFPLV SSFPSATPNG IKCSSSYFNR PPSSANSQPG SLMFLQPALP PLSTSEGKST  600
SPSRDHVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	5e-62	WRKY family protein