PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028120878.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 26844.7 Da PI: 9.3124 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96 | 1.6e-30 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLC+aeva+i+fss+g++yey+ XP_028120878.1 9 KRIENNTNRQVTFCKRRNGLLKKAYELSVLCEAEVALIVFSSRGRVYEYA 58 79***********************************************8 PP | |||||||
2 | K-box | 104.9 | 1e-34 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + e +a+ +qqe++kL+++i+++q+++R l+Ge+L+ L++keL+qLe++Le+++++iRskK+e++l+++e+lqk+e el++en Lr+k++e XP_028120878.1 82 TPEINAQFYQQESKKLRQQIQMIQNTNRSLMGEGLDCLNMKELKQLENRLERGITRIRSKKHEMILAETENLQKREMELENENAFLRAKIAE 173 567799***********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGRGKIEIKR IENNTNRQVT FCKRRNGLLK KAYELSVLCE AEVALIVFSS RGRVYEYANN 60 NIKSTIERYK KAVADNSNPC PTPEINAQFY QQESKKLRQQ IQMIQNTNRS LMGEGLDCLN 120 MKELKQLENR LERGITRIRS KKHEMILAET ENLQKREMEL ENENAFLRAK IAETERIQEQ 180 NMVPGEEYNA IQAYFARNDL VLQLNIMDAE HPPPPPAAAY QRFDKKSLHL G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 1e-105 | MIKC_MADS family protein |