PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120878.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 26844.7 Da    PI: 9.3124
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF961.6e-30958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLC+aeva+i+fss+g++yey+
  XP_028120878.1  9 KRIENNTNRQVTFCKRRNGLLKKAYELSVLCEAEVALIVFSSRGRVYEYA 58
                    79***********************************************8 PP

2K-box104.91e-34821739100
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     + e +a+ +qqe++kL+++i+++q+++R l+Ge+L+ L++keL+qLe++Le+++++iRskK+e++l+++e+lqk+e el++en  Lr+k++e
  XP_028120878.1  82 TPEINAQFYQQESKKLRQQIQMIQNTNRSLMGEGLDCLNMKELKQLENRLERGITRIRSKKHEMILAETENLQKREMELENENAFLRAKIAE 173
                     567799***********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGRGKIEIKR IENNTNRQVT FCKRRNGLLK KAYELSVLCE AEVALIVFSS RGRVYEYANN  60
NIKSTIERYK KAVADNSNPC PTPEINAQFY QQESKKLRQQ IQMIQNTNRS LMGEGLDCLN  120
MKELKQLENR LERGITRIRS KKHEMILAET ENLQKREMEL ENENAFLRAK IAETERIQEQ  180
NMVPGEEYNA IQAYFARNDL VLQLNIMDAE HPPPPPAAAY QRFDKKSLHL G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.11e-105MIKC_MADS family protein