PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028120707.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 681aa MW: 75775.2 Da PI: 7.4511

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028120707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	465	502	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ L++++gL+++qV++WF N R + XP_028120707.1 465 FEHflHPYPSDADKHLLSRQTGLSKNQVSNWFINARVR 502 664559******************************88 PP
2	BELL	103.1	2e-33	326	395	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + q+kk+kLls+l+eVd rY++y+e++qt+++sF+ v+g g+a Yt++A+ka+SrhF+c+k+ ia q+ XP_028120707.1 326 SAYQRKKVKLLSMLDEVDGRYRHYCEKMQTMVNSFDSVMGFGAALTYTAMAQKAMSRHFKCIKNGIAMQL 395 688****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MSTQNFHQGI FSFSNGYDRS AMTKHMVRGQ VFEPLLPVVT AQEVSGELPL YETGGGMLSE 60 MFAPAATAIF DNQIQTNYRW SQKLQNEAEM GGLGEQKHLN QDQFSNINSQ LVNSLQLPTM 120 NMMNTRVKPF SSPSSLQMLF SNPSNSHVQG GEEDSPVQFT WLHGNTGDDA NNTNKIGGTV 180 ESHGLSLSLC SSLEAAKFEE LRVGNGGIFF SNNQGGVGAS LNFNGSKNLR SERQLLDLEG 240 IVDRHGQVHV GFGTSLEMVN VLRNSKFVKA AQELLEEICC VGRGELRFKN QRPKKHHHIN 300 PNSNTDRHSG SSSMKEQPTL SAADKSAYQR KKVKLLSMLD EVDGRYRHYC EKMQTMVNSF 360 DSVMGFGAAL TYTAMAQKAM SRHFKCIKNG IAMQLKLTCE MLGEKDVTAG GMSCLTKGET 420 PRLRLIEQNL RQQKSLHMGM MELEAWRPQR GLPERSVNIL RAWLFEHFLH PYPSDADKHL 480 LSRQTGLSKN QVSNWFINAR VRLWKPMVED MYQKEAEEDQ ETVAKDAANS EDHPNTNSAQ 540 TPMHSTATTT TPPPSPPPRK DRSQNTIKHR HYSLGNEVMF QDTATTVTAT TTNTFSTSCH 600 DVIPSIYHSF SSTHDSTLRN WGATMEDMCR HESIVELGNF STAGARLGST PAGDVSLTLG 660 LLHTGNVPEK NQHSIRNFGP L

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MSTQNFHQGI FSFSNGYDRS AMTKHMVRGQ VFEPLLPVVT AQEVSGELPL YETGGGMLSE  60
MFAPAATAIF DNQIQTNYRW SQKLQNEAEM GGLGEQKHLN QDQFSNINSQ LVNSLQLPTM  120
NMMNTRVKPF SSPSSLQMLF SNPSNSHVQG GEEDSPVQFT WLHGNTGDDA NNTNKIGGTV  180
ESHGLSLSLC SSLEAAKFEE LRVGNGGIFF SNNQGGVGAS LNFNGSKNLR SERQLLDLEG  240
IVDRHGQVHV GFGTSLEMVN VLRNSKFVKA AQELLEEICC VGRGELRFKN QRPKKHHHIN  300
PNSNTDRHSG SSSMKEQPTL SAADKSAYQR KKVKLLSMLD EVDGRYRHYC EKMQTMVNSF  360
DSVMGFGAAL TYTAMAQKAM SRHFKCIKNG IAMQLKLTCE MLGEKDVTAG GMSCLTKGET  420
PRLRLIEQNL RQQKSLHMGM MELEAWRPQR GLPERSVNIL RAWLFEHFLH PYPSDADKHL  480
LSRQTGLSKN QVSNWFINAR VRLWKPMVED MYQKEAEEDQ ETVAKDAANS EDHPNTNSAQ  540
TPMHSTATTT TPPPSPPPRK DRSQNTIKHR HYSLGNEVMF QDTATTVTAT TTNTFSTSCH  600
DVIPSIYHSF SSTHDSTLRN WGATMEDMCR HESIVELGNF STAGARLGST PAGDVSLTLG  660
LLHTGNVPEK NQHSIRNFGP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-120	TALE family protein