PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028120630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 209aa MW: 24229.4 Da PI: 6.8785 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87.7 | 1.6e-27 | 43 | 132 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY+eYAk+vGF +r+++ ++s+ +++i +r++ C+k+g+ +++++ +r++r++tr gCka++ vk +k gkw vt++e+eH+H+l+ XP_028120630.1 43 KFYDEYAKRVGFVMRIDQCRRSEVDKRILSRRLSCNKQGYYVKSRDRFGPARKPRSTTREGCKAMMLVKVNKAGKWAVTRFEKEHTHPLV 132 6***************************************99999999****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MELDVGDGNV DSSVRMELGA SEEGVIQEPY VGMEFDSEEA AKKFYDEYAK RVGFVMRIDQ 60 CRRSEVDKRI LSRRLSCNKQ GYYVKSRDRF GPARKPRSTT REGCKAMMLV KVNKAGKWAV 120 TRFEKEHTHP LVISGHPSHD ATDTKDRRIQ ELTMELERQD QLCDLYREQI ITFLKKVEEQ 180 TEVLSTKIQD VVNNVRELET EVPNAPHHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 5e-68 | FAR1 family protein |