PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028120350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 229aa MW: 26242.5 Da PI: 7.7297 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.3 | 1.5e-26 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev v ++ss g+lye++s XP_028120350.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGVTVISSIGRLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 76.5 | 7e-26 | 76 | 169 | 8 | 98 |
K-box 8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++a+ +q+e++ L+++++ Lq+++R+l Ge+L++Ls+++L++Le qLe+slk iR+kK+++l+e+i+ l ++ ++en++L k++ XP_028120350.1 76 HqllSPTSEAKLWQREAESLRQQLNYLQESHRKLTGEELSDLSVEDLESLEGQLETSLKGIRTKKHQILTEEIQGLNHQGVISHQENMKLYKEV 169 334456788999******************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AEVGVTVISS IGRLYEFASP 60 SMRSIFERYN NEQENHQLLS PTSEAKLWQR EAESLRQQLN YLQESHRKLT GEELSDLSVE 120 DLESLEGQLE TSLKGIRTKK HQILTEEIQG LNHQGVISHQ ENMKLYKEVN VLQRENAELH 180 KKVYGANDIN RSSFKPYGCS NGYDLHVPIQ LQLSQPQQTH NETPETQGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 3e-76 | MIKC_MADS family protein |