PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028120343.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRF | ||||||||
Protein Properties | Length: 580aa MW: 62889.7 Da PI: 7.929 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 72.5 | 4.7e-23 | 223 | 266 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_028120343.1 223 DTEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVE 266 689**************************************987 PP | |||||||
2 | QLQ | 62.3 | 1.2e-21 | 153 | 189 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k XP_028120343.1 153 GPFTPSQWMELEQQALIYKYITANVPVPSNLLIPIRK 189 59*********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence |
MDLGVGGMLM VGLEDGFVGG GSDPYTSFSS DAPPHTNKQK LYGSWLLNKQ ERPEEEDDWR 60 SSCLKVAKTT TSEDDFSASK AALLRSPLLR SNSSDGQQIL SFSSPNSQAV PLPYFQYQHH 120 SSITTTYGRD TTGYGCGGMN GANMRGGLTV VRGPFTPSQW MELEQQALIY KYITANVPVP 180 SNLLIPIRKA LDSAGFSGFS GGHIVPTTFG WGAFRLGFSN TTDTEPGRCR RTDGKKWRCS 240 RDAVADQKYC ERHMNRGRHR SRKPVECQTG HSVSGPTTAT TTSKLMPMAS STTASGVPDS 300 LSRHPQLKNL QPGAANDRLF LNKENVGERS QAATDLCMLS PAIGLKENQY CIPKQQQNPY 360 GESSRSEFGL VCSDSLLNPL HKNSSHISCR NYGSSQDLND RENGSQRSVV RQFMDDWPKN 420 HTDHHHRSAV SWPNVDLQAD RTQLSISIPV AASSDPSNEK LALSSRELEM GLGVGSVVSE 480 PNQRQVNWIP ISWENSLGGP LGEVLHSTNN SSGGDCKSSS ALNLMTGGWD TNPSAQLASS 540 PTGVLQKMTF RSLSNSSAGS SPRADNHKTH EGNSSLLPAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22840.1 | 6e-94 | GRF family protein |