PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028120076.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 478aa MW: 52491.6 Da PI: 5.8746

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028120076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00052	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg+ + ++++ +H ++ XP_028120076.1 126 FECPVCGRAYGSQEEVSHHVDSC 148 89*****************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MDDMKDKVKG FMKKVNNPFS SSSSAKFKGQ GRVLGSSSSD NPNPNPILGR PSQTVDSKTS 60 QPPSSASANS KPSPQKPLNS DQHVTNRSGI RSNSDSNCKP STGFDPYDPL ITSGKRSANG 120 YSLNVFECPV CGRAYGSQEE VSHHVDSCLN STQANNVAFG SESSENDSVS EGRNELEACV 180 GAYVSGKPFD GSVEIVLKLL RNIVKEPENA KFRRIRMGNP KIREAIGDVT GCVELLECVG 240 FGLVDEDGEM WAAMEIPSEE GMLLIKKAIS LLETQKVEEL PSAAPSKIDE PVEPKKVDRQ 300 VRVFFSVSES VAAKIELPDS FYKLSLEEVR REAEMRKKKI AESQLLIPKS YKEKQAKATR 360 KRYKKTIIRV QFPDGVVLQA IFSPWEPTSA LYEFVSSALK EPSLEFELLH PVAIRRRVIP 420 HFPAAGERAI TLEEEDLVPA ALVKFRPIET DSILFTGLCN ELLEISEPLV VDSAVAPV

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MDDMKDKVKG FMKKVNNPFS SSSSAKFKGQ GRVLGSSSSD NPNPNPILGR PSQTVDSKTS  60
QPPSSASANS KPSPQKPLNS DQHVTNRSGI RSNSDSNCKP STGFDPYDPL ITSGKRSANG  120
YSLNVFECPV CGRAYGSQEE VSHHVDSCLN STQANNVAFG SESSENDSVS EGRNELEACV  180
GAYVSGKPFD GSVEIVLKLL RNIVKEPENA KFRRIRMGNP KIREAIGDVT GCVELLECVG  240
FGLVDEDGEM WAAMEIPSEE GMLLIKKAIS LLETQKVEEL PSAAPSKIDE PVEPKKVDRQ  300
VRVFFSVSES VAAKIELPDS FYKLSLEEVR REAEMRKKKI AESQLLIPKS YKEKQAKATR  360
KRYKKTIIRV QFPDGVVLQA IFSPWEPTSA LYEFVSSALK EPSLEFELLH PVAIRRRVIP  420
HFPAAGERAI TLEEEDLVPA ALVKFRPIET DSILFTGLCN ELLEISEPLV VDSAVAPV