PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028119731.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 25551.8 Da PI: 8.8125 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.5e-20 | 84 | 132 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp + r++lg++ taeeAa a+++a+k+++g XP_028119731.1 84 YRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTYNTAEEAAIAYDEAAKRIRG 132 9*******.**********94....35************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MCGGAIISDF VPDHWSRKLT TTDLWSELDP FSSDFFGLGS HGFKDLSSQS DNKKTTTRKP 60 KQLNKGKKSE GAKSQTQRTR KNIYRGIRQR PWGKWAAEIR DPQKGVRVWL GTYNTAEEAA 120 IAYDEAAKRI RGDKAKLNFA QPPPTPPPAK RRCVIPESTQ VSPLPTEPPP PPQVNCLDEF 180 EFKEQISSLE SFLGLDSVLT QFEGLGEANS VNLWMLEDLH HQNPLVY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 2e-47 | ERF family protein |